The 2.0 version of rSNPBase

Variant report

Variant rs2788862
Chromosome Location chr4:26369720-26369721
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:26323800-26374400 Weak transcription Lung lung
2 chr4:26325000-26374200 Weak transcription Fetal Intestine Large intestine
3 chr4:26344200-26370800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:26344200-26374200 Weak transcription Placenta Placenta
5 chr4:26348000-26374400 Weak transcription Fetal Stomach stomach
6 chr4:26351000-26374200 Weak transcription Right Atrium heart
7 chr4:26358000-26370600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr4:26358000-26373800 Weak transcription Rectal Smooth Muscle rectum
9 chr4:26358000-26374000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr4:26358000-26374200 Weak transcription Primary B cells from peripheral blood blood
11 chr4:26358000-26374200 Weak transcription Spleen Spleen
12 chr4:26358000-26387600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr4:26358000-26390600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr4:26358200-26370200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr4:26359000-26369800 Weak transcription HSMM muscle
16 chr4:26359800-26371200 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr4:26361400-26376600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr4:26361600-26370000 Weak transcription Ovary ovary
19 chr4:26362200-26374200 Weak transcription HSMMtube muscle
20 chr4:26362600-26375000 Weak transcription Aorta Aorta
21 chr4:26362800-26370200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr4:26362800-26370200 Weak transcription Psoas Muscle Psoas
23 chr4:26362800-26371400 Weak transcription Small Intestine intestine
24 chr4:26362800-26374200 Weak transcription Fetal Thymus thymus
25 chr4:26362800-26374200 Weak transcription Left Ventricle heart
26 chr4:26362800-26374200 Weak transcription Right Ventricle heart
27 chr4:26363000-26369800 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr4:26364000-26374000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr4:26364000-26374200 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr4:26364200-26373400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr4:26364200-26374000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr4:26364600-26370200 Weak transcription NHEK skin
33 chr4:26364600-26373200 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr4:26365000-26370200 Weak transcription NHLF lung
35 chr4:26365200-26374200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr4:26365200-26374400 Weak transcription Primary T cells fromperipheralblood blood
37 chr4:26365800-26374000 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr4:26367200-26373200 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr4:26367200-26374200 Weak transcription HUVEC blood vessel
40 chr4:26367400-26369800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr4:26367600-26369800 Weak transcription Colon Smooth Muscle Colon
42 chr4:26367600-26370200 Strong transcription Primary monocytes fromperipheralblood blood
43 chr4:26367600-26373400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr4:26367600-26373800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr4:26367600-26373800 Weak transcription Fetal Kidney kidney
46 chr4:26367800-26373800 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr4:26367800-26374200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr4:26367800-26374200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr4:26368200-26370000 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr4:26368800-26369800 Enhancers Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015