Variant report

Variant	rs2789726
Chromosome Location	chr1:216973196-216973197
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs12139635	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1339340	0.87[ASN][1000 genomes]
rs1339358	0.86[CHB][hapmap];0.83[CHD][hapmap];0.83[GIH][hapmap];0.90[JPT][hapmap];0.83[ASN][1000 genomes]
rs1370143	0.94[JPT][hapmap];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1542001	0.86[CHB][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs17044026	0.80[CHD][hapmap];0.89[GIH][hapmap];0.89[JPT][hapmap];0.86[TSI][hapmap];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2576237	0.86[CHB][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs2789719	0.87[ASN][1000 genomes]
rs2813663	0.81[GIH][hapmap]
rs2813664	0.87[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs2813665	0.87[CHB][hapmap];0.94[JPT][hapmap];0.81[ASN][1000 genomes]
rs2813667	0.81[CHB][hapmap]
rs2813672	0.85[CHB][hapmap];0.83[CHD][hapmap];0.83[GIH][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs2813675	0.86[CHB][hapmap];0.83[CHD][hapmap];0.83[GIH][hapmap];0.90[JPT][hapmap];0.85[ASN][1000 genomes]
rs3738490	0.83[GIH][hapmap];0.84[JPT][hapmap];0.87[ASN][1000 genomes]
rs6686329	0.86[CHB][hapmap];0.90[JPT][hapmap];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs766158	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs766159	0.86[CHB][hapmap];0.83[CHD][hapmap];0.83[GIH][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links