Variant report

Variant	rs2813664
Chromosome Location	chr1:216975202-216975203
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1339358	0.84[JPT][hapmap]
rs1370143	0.88[JPT][hapmap]
rs1542001	0.85[JPT][hapmap]
rs17044026	0.84[JPT][hapmap]
rs2576237	0.85[JPT][hapmap]
rs2789726	0.87[CHB][hapmap];0.95[JPT][hapmap]
rs2813663	1.00[CEU][hapmap];0.81[JPT][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2813665	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2813672	0.84[JPT][hapmap]
rs2813675	0.84[JPT][hapmap]
rs6686329	0.85[JPT][hapmap]
rs766158	0.85[JPT][hapmap]
rs766159	0.84[JPT][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216973600-216977200	Weak transcription	Fetal Heart	heart
2	chr1:216974200-216976400	Weak transcription	Psoas Muscle	Psoas
3	chr1:216974800-216978600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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