Variant report
Variant | rs2796205 |
---|---|
Chromosome Location | chr1:71672332-71672333 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:71672123..71674312-chr1:71679982..71682274,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs2567416 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2639342 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2744910 | 1.00[AMR][1000 genomes] |
rs2744912 | 1.00[AMR][1000 genomes] |
rs2744913 | 1.00[AMR][1000 genomes] |
rs2744917 | 1.00[AMR][1000 genomes] |
rs2796191 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2796193 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2796194 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2817856 | 1.00[AMR][1000 genomes] |
rs2817859 | 1.00[AMR][1000 genomes] |
rs2817861 | 1.00[AMR][1000 genomes] |
rs2817862 | 1.00[AMR][1000 genomes] |
rs2817863 | 1.00[AMR][1000 genomes] |
rs4146734 | 1.00[AMR][1000 genomes] |
rs5689 | 1.00[AMR][1000 genomes] |
rs6424416 | 1.00[AMR][1000 genomes] |
rs6424417 | 1.00[AMR][1000 genomes] |
rs6661368 | 1.00[AMR][1000 genomes] |
rs9425056 | 1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv949599 | chr1:71655652-72327802 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:71665600-71672400 | Weak transcription | Pancreas | Pancrea |