Variant report
| Variant | rs4146734 |
|---|---|
| Chromosome Location | chr1:71567003-71567004 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr1:71544366..71547051-chr1:71565593..71567757,2 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000229956 | Chromatin interaction |
| ENSG00000132485 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:23)
| rs_ID | r2[population] |
|---|---|
| rs17090676 | 1.00[AMR][1000 genomes] |
| rs2567416 | 1.00[AMR][1000 genomes] |
| rs2639342 | 1.00[AMR][1000 genomes] |
| rs2744910 | 1.00[AMR][1000 genomes] |
| rs2744912 | 1.00[AMR][1000 genomes] |
| rs2744913 | 1.00[AMR][1000 genomes] |
| rs2744917 | 1.00[AMR][1000 genomes] |
| rs2796191 | 1.00[AMR][1000 genomes] |
| rs2796193 | 1.00[AMR][1000 genomes] |
| rs2796194 | 1.00[AMR][1000 genomes] |
| rs2796205 | 1.00[AMR][1000 genomes] |
| rs2817856 | 1.00[AMR][1000 genomes] |
| rs2817859 | 1.00[AMR][1000 genomes] |
| rs2817861 | 1.00[AMR][1000 genomes] |
| rs2817862 | 1.00[AMR][1000 genomes] |
| rs2817863 | 1.00[AMR][1000 genomes] |
| rs5689 | 1.00[AMR][1000 genomes] |
| rs6424416 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6424417 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6661368 | 1.00[AMR][1000 genomes] |
| rs6667630 | 1.00[AMR][1000 genomes] |
| rs7539573 | 1.00[AMR][1000 genomes] |
| rs9425056 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
