Variant report

Variant	rs2836551
Chromosome Location	chr21:39972377-39972378
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs13051259	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2070526	0.92[EUR][1000 genomes]
rs2212596	0.92[CEU][hapmap]
rs2244890	0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2836554	0.82[EUR][1000 genomes]
rs386076	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs460574	0.81[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs460695	0.82[ASN][1000 genomes]
rs464729	0.88[CEU][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs467207	0.81[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs9636639	0.82[EUR][1000 genomes]
rs9789883	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9976134	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9977611	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39969000-39976600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr21:39969400-39973000	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr21:39970200-39977200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr21:39970400-39976600	Weak transcription	Fetal Brain Male	brain
5	chr21:39971200-39972400	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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