Variant report

Variant	rs460574
Chromosome Location	chr21:39986245-39986246
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs13051259	0.87[ASN][1000 genomes]
rs2212596	0.82[GIH][hapmap];0.80[MEX][hapmap];0.84[TSI][hapmap]
rs2244890	0.90[ASN][1000 genomes]
rs2836551	0.81[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs386076	0.91[ASN][1000 genomes]
rs460695	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs464729	0.87[ASW][hapmap];0.88[CEU][hapmap];0.94[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.96[MEX][hapmap];0.80[MKK][hapmap];0.89[TSI][hapmap];0.80[AFR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs467207	0.82[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs9789883	0.90[ASN][1000 genomes]
rs9976134	0.90[ASN][1000 genomes]
rs9977611	0.90[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39985200-39986800	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr21:39985400-39986800	Enhancers	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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