Variant report

Variant	rs9977611
Chromosome Location	chr21:39970181-39970182
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs13051259	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13052546	0.91[EUR][1000 genomes]
rs2212596	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2244890	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2836551	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs386076	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs460574	0.90[ASN][1000 genomes]
rs460695	0.81[ASN][1000 genomes]
rs464729	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs467207	0.84[ASN][1000 genomes]
rs9789875	0.90[EUR][1000 genomes]
rs9789883	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9976134	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39955800-39971200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr21:39967000-39971400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr21:39969000-39970400	Weak transcription	Spleen	Spleen
4	chr21:39969000-39976600	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr21:39969400-39973000	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr21:39969600-39970200	Weak transcription	Fetal Brain Male	brain
7	chr21:39969800-39971000	Enhancers	Aorta	Aorta
8	chr21:39970000-39970200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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