Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:40039125..40041659-chr21:40042209..40043754,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11911171	0.93[CHB][hapmap];1.00[EUR][1000 genomes]
rs12626880	1.00[EUR][1000 genomes]
rs12627063	1.00[EUR][1000 genomes]
rs12627644	0.89[ASN][1000 genomes]
rs16996685	0.93[CHB][hapmap];1.00[EUR][1000 genomes]
rs16996732	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2836597	0.81[CHB][hapmap]
rs2836600	0.93[CHB][hapmap];1.00[EUR][1000 genomes]
rs2836601	0.93[CHB][hapmap];1.00[EUR][1000 genomes]
rs2836605	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2836609	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28723628	1.00[EUR][1000 genomes]
rs28760544	1.00[EUR][1000 genomes]
rs58124270	1.00[EUR][1000 genomes]
rs7276282	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73432980	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73446333	1.00[EUR][1000 genomes]
rs73446339	1.00[EUR][1000 genomes]
rs73446340	1.00[EUR][1000 genomes]
rs73446346	1.00[EUR][1000 genomes]
rs73446348	1.00[EUR][1000 genomes]
rs73446356	1.00[EUR][1000 genomes]
rs73446361	1.00[EUR][1000 genomes]
rs73446368	1.00[EUR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40040000-40071200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr21:40041600-40045000	Enhancers	Fetal Brain Male	brain
3	chr21:40042800-40043800	Enhancers	Aorta	Aorta
4	chr21:40042800-40044200	Enhancers	Ovary	ovary
5	chr21:40043400-40044200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr21:40043400-40044400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr21:40043400-40044600	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr21:40043400-40044600	Enhancers	Fetal Lung	lung
9	chr21:40043400-40044600	Enhancers	Fetal Stomach	stomach
10	chr21:40043600-40043800	Enhancers	Fetal Intestine Small	intestine
11	chr21:40043600-40044200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr21:40043600-40044200	Bivalent Enhancer	Osteobl	bone
13	chr21:40043600-40044400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr21:40043600-40044400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr21:40043600-40044400	Enhancers	Rectal Smooth Muscle	rectum
16	chr21:40043600-40044600	Enhancers	Brain Cingulate Gyrus	brain
17	chr21:40043600-40044600	Enhancers	Colon Smooth Muscle	Colon
18	chr21:40043600-40045000	Enhancers	Fetal Muscle Leg	muscle

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