The 2.0 version of rSNPBase

Variant report

Variant rs28456317
Chromosome Location chr4:79719361-79719362
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79699400-79722600 Weak transcription Fetal Thymus thymus
2 chr4:79700200-79732800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr4:79702000-79731200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr4:79703000-79720800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr4:79703200-79720800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr4:79703400-79720800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr4:79705600-79731200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr4:79706000-79720000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr4:79706000-79720200 Weak transcription Primary T cells from cord blood blood
10 chr4:79706000-79720200 Weak transcription NHEK skin
11 chr4:79706000-79720800 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr4:79706200-79722200 Weak transcription HSMM muscle
13 chr4:79706600-79722800 Weak transcription Brain Substantia Nigra brain
14 chr4:79707000-79721000 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr4:79707600-79721800 Weak transcription Fetal Muscle Leg muscle
16 chr4:79707800-79720800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr4:79707800-79720800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr4:79709000-79720800 Weak transcription NHLF lung
19 chr4:79709200-79723800 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr4:79709200-79731200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr4:79709400-79724000 Weak transcription Fetal Intestine Small intestine
22 chr4:79709600-79720600 Weak transcription Osteobl bone
23 chr4:79709600-79721400 Weak transcription Brain Anterior Caudate brain
24 chr4:79710000-79720200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr4:79710000-79720600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr4:79710400-79725200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr4:79711000-79720800 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr4:79714400-79748400 Weak transcription Aorta Aorta
29 chr4:79715400-79730400 Weak transcription Left Ventricle heart
30 chr4:79716400-79720800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr4:79716600-79721200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr4:79716600-79726200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:79716600-79726800 Weak transcription Fetal Intestine Large intestine
34 chr4:79716800-79726200 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr4:79717600-79721200 Enhancers Primary B cells from peripheral blood blood
36 chr4:79717800-79719600 Enhancers GM12878-XiMat blood
37 chr4:79718200-79719600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr4:79718200-79721200 Weak transcription NHDF-Ad bronchial
39 chr4:79718400-79721200 Weak transcription Primary monocytes fromperipheralblood blood
40 chr4:79718400-79725400 Weak transcription Primary hematopoietic stem cells blood
41 chr4:79718400-79726200 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr4:79718600-79720400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr4:79718800-79720800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr4:79718800-79721200 Weak transcription Fetal Heart heart
45 chr4:79718800-79721600 Genic enhancers Primary B cells from cord blood blood
46 chr4:79719000-79719600 Enhancers Psoas Muscle Psoas
47 chr4:79719000-79719600 Enhancers Right Atrium heart
48 chr4:79719000-79719800 Genic enhancers K562 blood
49 chr4:79719200-79719400 Enhancers H9 Cell Line embryonic stem cell
50 chr4:79719200-79719400 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015