Variant report
| Variant | rs28556992 |
|---|---|
| Chromosome Location | chr15:72056425-72056426 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:72021600-72071400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr15:72030400-72075800 | Weak transcription | Right Ventricle | heart |
| 3 | chr15:72036400-72071400 | Weak transcription | Fetal Lung | lung |
| 4 | chr15:72042000-72056800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 5 | chr15:72045600-72073000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 6 | chr15:72046200-72057200 | Weak transcription | Aorta | Aorta |
| 7 | chr15:72050400-72056800 | Weak transcription | Pancreas | Pancrea |
| 8 | chr15:72050600-72056800 | Weak transcription | Esophagus | oesophagus |
| 9 | chr15:72050600-72057200 | Weak transcription | Lung | lung |
| 10 | chr15:72050600-72061000 | Weak transcription | Colonic Mucosa | Colon |
| 11 | chr15:72051600-72060200 | Weak transcription | Fetal Kidney | kidney |
| 12 | chr15:72052600-72058800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 13 | chr15:72053000-72057000 | Weak transcription | Liver | Liver |
| 14 | chr15:72053000-72073000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 15 | chr15:72053600-72057000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 16 | chr15:72054400-72056800 | Weak transcription | NHEK | skin |
| 17 | chr15:72054400-72057200 | Weak transcription | Fetal Muscle Leg | muscle |
| 18 | chr15:72054400-72057200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 19 | chr15:72054400-72064200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 20 | chr15:72054600-72056600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 21 | chr15:72054600-72056800 | Weak transcription | NHLF | lung |
| 22 | chr15:72054600-72057200 | Weak transcription | Gastric | stomach |
| 23 | chr15:72054600-72064000 | Weak transcription | Left Ventricle | heart |
| 24 | chr15:72054600-72072400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 25 | chr15:72054600-72075000 | Weak transcription | Stomach Mucosa | stomach |
| 26 | chr15:72054800-72059800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 27 | chr15:72054800-72069400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 28 | chr15:72054800-72071600 | Weak transcription | Hela-S3 | cervix |
| 29 | chr15:72054800-72072400 | Weak transcription | Osteobl | bone |
| 30 | chr15:72054800-72081400 | Weak transcription | HMEC | breast |
| 31 | chr15:72055000-72057000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 32 | chr15:72055000-72057000 | Weak transcription | A549 | lung |
| 33 | chr15:72055000-72057200 | Weak transcription | Fetal Intestine Large | intestine |
| 34 | chr15:72055000-72059000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 35 | chr15:72055000-72063400 | Weak transcription | Placenta | Placenta |
| 36 | chr15:72055000-72063600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 37 | chr15:72055000-72070800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 38 | chr15:72055000-72071600 | Weak transcription | Fetal Heart | heart |
| 39 | chr15:72055000-72072600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 40 | chr15:72055600-72059400 | Strong transcription | Fetal Stomach | stomach |
| 41 | chr15:72055800-72058200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 42 | chr15:72055800-72059400 | Strong transcription | Fetal Intestine Small | intestine |
| 43 | chr15:72055800-72066000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 44 | chr15:72056000-72059000 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 45 | chr15:72056200-72061200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 46 | chr15:72056400-72059000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 47 | chr15:72056400-72059200 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 48 | chr15:72056400-72060800 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
