The 2.0 version of rSNPBase

Variant report

Variant rs28653462
Chromosome Location chr8:61636174-61636175
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:61615600-61644400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr8:61621200-61646400 Weak transcription Fetal Brain Male brain
3 chr8:61621600-61636400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr8:61621800-61638200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr8:61627600-61636600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr8:61627600-61637200 Weak transcription HMEC breast
7 chr8:61627800-61638200 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr8:61627800-61644400 Weak transcription Fetal Kidney kidney
9 chr8:61628200-61636200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr8:61628800-61636400 Weak transcription Hela-S3 cervix
11 chr8:61628800-61636600 Weak transcription NHEK skin
12 chr8:61629000-61637600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr8:61630200-61637400 Weak transcription Stomach Mucosa stomach
14 chr8:61631400-61637800 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr8:61631400-61638200 Weak transcription A549 lung
16 chr8:61631800-61636400 Weak transcription Pancreas Pancrea
17 chr8:61631800-61637600 Weak transcription Gastric stomach
18 chr8:61632400-61637600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr8:61633200-61636200 Weak transcription Primary B cells from cord blood blood
20 chr8:61633400-61636400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr8:61633400-61636400 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr8:61633600-61636400 Weak transcription Fetal Muscle Trunk muscle
23 chr8:61633800-61638000 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr8:61634200-61637600 Weak transcription Lung lung
25 chr8:61634400-61636400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr8:61634400-61638200 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr8:61634400-61643400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr8:61634400-61643400 Weak transcription HepG2 liver
29 chr8:61634600-61636200 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr8:61634600-61636200 Weak transcription Brain Angular Gyrus brain
31 chr8:61634600-61636400 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr8:61634600-61638000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr8:61634600-61638600 Enhancers Brain Hippocampus Middle brain
34 chr8:61634800-61636200 Weak transcription GM12878-XiMat blood
35 chr8:61634800-61636600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr8:61634800-61638200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr8:61634800-61638200 Weak transcription Right Atrium heart
38 chr8:61634800-61640400 Weak transcription Left Ventricle heart
39 chr8:61634800-61647000 Weak transcription H9 Cell Line embryonic stem cell
40 chr8:61635000-61636600 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr8:61635000-61636800 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr8:61635000-61636800 Weak transcription Brain Anterior Caudate brain
43 chr8:61635000-61636800 Weak transcription Fetal Intestine Large intestine
44 chr8:61635000-61637600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr8:61635000-61637600 Weak transcription Duodenum Mucosa Duodenum
46 chr8:61635000-61654200 Weak transcription Fetal Intestine Small intestine
47 chr8:61635200-61636600 Weak transcription HSMM muscle
48 chr8:61635200-61636800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
49 chr8:61635600-61636600 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr8:61635600-61639000 Enhancers Brain Substantia Nigra brain

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Last update: Aug 31, 2015