Variant report

Variant	rs28835013
Chromosome Location	chrX:154094064-154094065
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs2051161	0.87[ASW][hapmap];0.94[CEU][hapmap];0.88[GIH][hapmap]
rs2728530	0.85[ASW][hapmap];1.00[MEX][hapmap]
rs4074307	0.80[GIH][hapmap]
rs4431759	1.00[LWK][hapmap]
rs5945282	1.00[ASW][hapmap];1.00[CEU][hapmap];0.83[CHB][hapmap];0.91[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];0.84[MKK][hapmap];0.86[TSI][hapmap]
rs6643615	1.00[LWK][hapmap]
rs6643620	1.00[ASW][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];0.87[JPT][hapmap]
rs6643711	0.87[ASW][hapmap];0.94[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.97[GIH][hapmap];0.87[JPT][hapmap];0.92[MKK][hapmap];0.93[TSI][hapmap]
rs6643714	1.00[ASW][hapmap];1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap]
rs884840	1.00[LWK][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:154068000-154095600	Weak transcription	Ovary	ovary
2	chrX:154079400-154097000	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chrX:154090200-154097200	Weak transcription	Left Ventricle	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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