Variant report

Variant	rs4074307
Chromosome Location	chrX:154130223-154130224
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	X:154130142-154132988..X:154298909-154305587	Hela-S3	cervix:

Variant related genes	Relation type
ENSG00000182712	Chromatin interaction
ENSG00000214827	Chromatin interaction
ENSG00000185515	Chromatin interaction

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs1050705	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.95[TSI][hapmap];0.82[YRI][hapmap]
rs1075950	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs1126762	0.89[CHD][hapmap]
rs1470586	0.81[CEU][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap]
rs1472977	1.00[ASW][hapmap];1.00[CHB][hapmap];0.83[CHD][hapmap];1.00[JPT][hapmap]
rs17051889	0.81[CEU][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap]
rs1848762	0.89[CHD][hapmap]
rs1936645	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap]
rs2084409	0.94[CEU][hapmap];0.82[GIH][hapmap];0.88[MEX][hapmap]
rs2096362	1.00[CEU][hapmap];0.89[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.82[TSI][hapmap]
rs2221730	0.89[CHD][hapmap]
rs2313058	1.00[CEU][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap]
rs2664161	1.00[ASW][hapmap];0.81[CEU][hapmap];0.87[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap]
rs2728538	0.87[CHB][hapmap];0.94[CHD][hapmap]
rs28835013	0.80[GIH][hapmap]
rs4898352	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap]
rs4898396	0.89[CHD][hapmap]
rs4898397	1.00[JPT][hapmap]
rs4898406	0.81[CEU][hapmap];0.89[CHD][hapmap];1.00[JPT][hapmap]
rs4898407	1.00[JPT][hapmap]
rs4898408	0.81[CEU][hapmap]
rs5945133	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs5945134	0.81[CEU][hapmap];1.00[JPT][hapmap]
rs5945250	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs5945279	0.81[CEU][hapmap];0.89[CHD][hapmap];1.00[JPT][hapmap]
rs5945281	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs5945287	0.80[CEU][hapmap]
rs5986902	0.81[CEU][hapmap]
rs5987077	1.00[CEU][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap]
rs5987079	1.00[CEU][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap]
rs5987092	0.94[CEU][hapmap];0.85[GIH][hapmap];0.81[MEX][hapmap]
rs6643622	0.87[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.88[MEX][hapmap];0.81[TSI][hapmap];0.82[YRI][hapmap]
rs6643711	0.83[GIH][hapmap]
rs6643714	0.80[GIH][hapmap]
rs965691	0.88[MEX][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:154116200-154131000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chrX:154120800-154134800	Weak transcription	Left Ventricle	heart

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