Variant report
| Variant | rs28914485 |
|---|---|
| Chromosome Location | chr1:179146327-179146328 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:179117800-179186000 | Weak transcription | Fetal Stomach | stomach |
| 2 | chr1:179122000-179189400 | Weak transcription | Primary B cells from cord blood | blood |
| 3 | chr1:179122400-179153000 | Weak transcription | Primary T cells from cord blood | blood |
| 4 | chr1:179134000-179146600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 5 | chr1:179134000-179169000 | Weak transcription | Fetal Intestine Small | intestine |
| 6 | chr1:179139400-179146400 | Weak transcription | Right Atrium | heart |
| 7 | chr1:179139400-179157200 | Weak transcription | K562 | blood |
| 8 | chr1:179139400-179158800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 9 | chr1:179139400-179196800 | Weak transcription | Pancreas | Pancrea |
| 10 | chr1:179139800-179147200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 11 | chr1:179144000-179149000 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 12 | chr1:179144200-179147400 | Enhancers | HSMM | muscle |
| 13 | chr1:179144400-179148600 | Enhancers | Osteobl | bone |
| 14 | chr1:179144800-179146400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 15 | chr1:179144800-179146400 | Weak transcription | A549 | lung |
| 16 | chr1:179144800-179149000 | Enhancers | NHDF-Ad | bronchial |
| 17 | chr1:179144800-179159200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 18 | chr1:179145000-179146400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 19 | chr1:179145000-179146400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 20 | chr1:179145000-179146400 | Weak transcription | Brain Hippocampus Middle | brain |
| 21 | chr1:179145000-179147600 | Enhancers | Psoas Muscle | Psoas |
| 22 | chr1:179145000-179148000 | Weak transcription | Hela-S3 | cervix |
| 23 | chr1:179145000-179148000 | Weak transcription | NHEK | skin |
| 24 | chr1:179145000-179158600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 25 | chr1:179145000-179159800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 26 | chr1:179145000-179159800 | Weak transcription | Brain Angular Gyrus | brain |
| 27 | chr1:179145400-179146400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 28 | chr1:179145400-179146400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 29 | chr1:179145400-179146400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 30 | chr1:179145400-179146400 | Weak transcription | Placenta | Placenta |
| 31 | chr1:179145400-179146400 | Weak transcription | Left Ventricle | heart |
| 32 | chr1:179145400-179159000 | Weak transcription | Right Ventricle | heart |
| 33 | chr1:179146000-179147200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr1:179146000-179147400 | Enhancers | Fetal Muscle Leg | muscle |
| 35 | chr1:179146000-179148800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 36 | chr1:179146000-179149200 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 37 | chr1:179146000-179150600 | Enhancers | HSMMtube | muscle |
| 38 | chr1:179146200-179146600 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 39 | chr1:179146200-179146600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 40 | chr1:179146200-179146600 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 41 | chr1:179146200-179146600 | Enhancers | Brain Substantia Nigra | brain |
| 42 | chr1:179146200-179146600 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 43 | chr1:179146200-179146600 | Enhancers | Ovary | ovary |
| 44 | chr1:179146200-179146600 | Enhancers | Rectal Smooth Muscle | rectum |
| 45 | chr1:179146200-179146800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 46 | chr1:179146200-179146800 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 47 | chr1:179146200-179146800 | Enhancers | NHLF | lung |
| 48 | chr1:179146200-179147000 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 49 | chr1:179146200-179147000 | Enhancers | Brain Anterior Caudate | brain |
| 50 | chr1:179146200-179147000 | Enhancers | Fetal Heart | heart |
