Variant report

Variant rs28989225
Chromosome Location chr4:144303288-144303289
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144296800-144304600 Enhancers Liver Liver
2 chr4:144297200-144305600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr4:144298000-144303600 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr4:144298000-144305800 Enhancers Fetal Stomach stomach
5 chr4:144299000-144303400 Enhancers HepG2 liver
6 chr4:144299000-144304600 Enhancers HUES48 Cell Line embryonic stem cell
7 chr4:144299400-144303400 Enhancers H1 Cell Line embryonic stem cell
8 chr4:144299600-144303800 Weak transcription Primary monocytes fromperipheralblood blood
9 chr4:144300200-144307000 Enhancers Colon Smooth Muscle Colon
10 chr4:144301000-144304000 Enhancers iPS-20b Cell Line embryonic stem cell
11 chr4:144301000-144305000 Weak transcription Fetal Muscle Trunk muscle
12 chr4:144301200-144305200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr4:144301600-144303600 Enhancers Duodenum Smooth Muscle Duodenum
14 chr4:144301600-144304600 Enhancers Duodenum Mucosa Duodenum
15 chr4:144301600-144304600 Enhancers GM12878-XiMat blood
16 chr4:144301600-144307800 Enhancers Primary B cells from peripheral blood blood
17 chr4:144301800-144303400 Enhancers Sigmoid Colon Sigmoid Colon
18 chr4:144301800-144303600 Enhancers Ovary ovary
19 chr4:144301800-144304000 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr4:144301800-144304400 Enhancers HUES6 Cell Line embryonic stem cell
21 chr4:144301800-144304400 Enhancers HUES64 Cell Line embryonic stem cell
22 chr4:144301800-144304400 Enhancers Fetal Kidney kidney
23 chr4:144301800-144304600 Enhancers Fetal Intestine Large intestine
24 chr4:144301800-144306000 Enhancers Rectal Mucosa Donor 31 rectum
25 chr4:144302000-144303400 Enhancers NHLF lung
26 chr4:144302000-144303600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
27 chr4:144302000-144303800 Enhancers Rectal Mucosa Donor 29 rectum
28 chr4:144302000-144304000 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr4:144302000-144304000 Enhancers iPS-18 Cell Line embryonic stem cell
30 chr4:144302000-144304600 Enhancers K562 blood
31 chr4:144302000-144305800 Enhancers Primary hematopoietic stem cells short term culture blood
32 chr4:144302200-144303400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:144302200-144303400 Enhancers Colonic Mucosa Colon
34 chr4:144302200-144303600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr4:144302200-144303600 Enhancers HMEC breast
36 chr4:144302200-144304200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr4:144302200-144304200 Enhancers Stomach Mucosa stomach
38 chr4:144302200-144304600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr4:144302200-144304600 Enhancers Cortex derived primary cultured neurospheres brain
40 chr4:144302200-144304600 Enhancers Psoas Muscle Psoas
41 chr4:144302200-144304600 Enhancers Small Intestine intestine
42 chr4:144302200-144304600 Enhancers NHEK skin
43 chr4:144302200-144307000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
44 chr4:144302200-144307000 Enhancers NHDF-Ad bronchial
45 chr4:144302400-144303600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr4:144302400-144304600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr4:144302600-144303400 Flanking Active TSS Fetal Heart heart
48 chr4:144302600-144303600 Enhancers Muscle Satellite Cultured Cells --
49 chr4:144302600-144303800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr4:144302600-144304000 Enhancers Pancreatic Islets Pancreatic Islet

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