The 2.0 version of rSNPBase

Variant report

Variant rs2911561
Chromosome Location chr1:85123713-85123714
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85087000-85147400 Weak transcription Gastric stomach
2 chr1:85099200-85138200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:85099400-85131200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:85101000-85124400 Weak transcription Hela-S3 cervix
5 chr1:85106200-85140400 Weak transcription NHEK skin
6 chr1:85106400-85155400 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:85108000-85155000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:85108200-85128800 Weak transcription GM12878-XiMat blood
9 chr1:85109200-85133000 Weak transcription Pancreas Pancrea
10 chr1:85110800-85129400 Strong transcription Fetal Thymus thymus
11 chr1:85111200-85123800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:85111400-85128400 Strong transcription HUES48 Cell Line embryonic stem cell
13 chr1:85111400-85131400 Weak transcription HSMM muscle
14 chr1:85111600-85127800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr1:85111800-85152000 Weak transcription Aorta Aorta
16 chr1:85112400-85129000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:85112400-85138200 Strong transcription K562 blood
18 chr1:85112600-85130600 Strong transcription iPS-20b Cell Line embryonic stem cell
19 chr1:85113000-85131200 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:85113200-85138200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr1:85113400-85129200 Weak transcription Fetal Heart heart
22 chr1:85113400-85138200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr1:85113800-85126600 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:85114200-85126600 Weak transcription NH-A brain
25 chr1:85114400-85124000 Weak transcription Rectal Smooth Muscle rectum
26 chr1:85114400-85127600 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr1:85114400-85130800 Weak transcription Ovary ovary
28 chr1:85114400-85139000 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr1:85114600-85124200 Weak transcription Brain Angular Gyrus brain
30 chr1:85114600-85130800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:85114800-85128000 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr1:85114800-85128600 Strong transcription Dnd41 blood
33 chr1:85114800-85133000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr1:85114800-85134000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr1:85115400-85137800 Weak transcription Small Intestine intestine
36 chr1:85115800-85133800 Weak transcription Lung lung
37 chr1:85116200-85128600 Weak transcription Fetal Lung lung
38 chr1:85116200-85135400 Weak transcription HMEC breast
39 chr1:85116400-85124000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:85116400-85134800 Weak transcription Brain Cingulate Gyrus brain
41 chr1:85117200-85124000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr1:85117200-85126000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:85117400-85125400 Weak transcription Spleen Spleen
44 chr1:85117800-85137800 Weak transcription Psoas Muscle Psoas
45 chr1:85118000-85127200 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr1:85119200-85134600 Weak transcription Right Ventricle heart
47 chr1:85119400-85131400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr1:85119400-85136600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr1:85120200-85128800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:85120400-85126000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015