The 2.0 version of rSNPBase

Variant report

Variant rs11164036
Chromosome Location chr1:85138686-85138687
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85087000-85147400 Weak transcription Gastric stomach
2 chr1:85106200-85140400 Weak transcription NHEK skin
3 chr1:85106400-85155400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:85108000-85155000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:85111800-85152000 Weak transcription Aorta Aorta
6 chr1:85114400-85139000 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr1:85123600-85139200 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr1:85123800-85140600 Weak transcription Brain Substantia Nigra brain
9 chr1:85124400-85144400 Weak transcription Rectal Smooth Muscle rectum
10 chr1:85124400-85145200 Weak transcription Fetal Brain Male brain
11 chr1:85124400-85149200 Weak transcription Brain Angular Gyrus brain
12 chr1:85124600-85140200 Weak transcription Colon Smooth Muscle Colon
13 chr1:85124600-85154400 Weak transcription A549 lung
14 chr1:85124800-85138800 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr1:85124800-85153800 Weak transcription Hela-S3 cervix
16 chr1:85125000-85153400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:85125000-85153600 Weak transcription Fetal Kidney kidney
18 chr1:85125600-85141600 Weak transcription H9 Cell Line embryonic stem cell
19 chr1:85126200-85140200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:85126200-85154000 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr1:85126400-85143000 Weak transcription Primary hematopoietic stem cells blood
22 chr1:85126400-85154200 Weak transcription Primary T cells fromperipheralblood blood
23 chr1:85126400-85154800 Weak transcription Fetal Muscle Leg muscle
24 chr1:85126400-85155200 Weak transcription Left Ventricle heart
25 chr1:85126600-85152200 Weak transcription Thymus Thymus
26 chr1:85126600-85153400 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:85126600-85154400 Weak transcription Fetal Stomach stomach
28 chr1:85126800-85141400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:85127800-85140600 Weak transcription Duodenum Mucosa Duodenum
30 chr1:85127800-85154400 Weak transcription Brain Germinal Matrix brain
31 chr1:85128000-85139000 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr1:85128200-85153600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:85128400-85140800 Weak transcription Brain Anterior Caudate brain
34 chr1:85128400-85141000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:85128600-85139800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:85128600-85153200 Weak transcription Dnd41 blood
37 chr1:85128800-85151000 Weak transcription Fetal Brain Female brain
38 chr1:85129000-85139000 Weak transcription Liver Liver
39 chr1:85129600-85139000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:85130000-85143000 Weak transcription Primary B cells from cord blood blood
41 chr1:85130400-85153600 Weak transcription NHDF-Ad bronchial
42 chr1:85131800-85143200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:85132000-85145200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr1:85133600-85143200 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr1:85134200-85138800 Weak transcription Primary T cells from cord blood blood
46 chr1:85134400-85153400 Weak transcription NHLF lung
47 chr1:85134800-85139800 Weak transcription Fetal Intestine Large intestine
48 chr1:85135800-85139200 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr1:85135800-85139600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:85136200-85139000 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015