Variant report

Variant	rs10465723
Chromosome Location	chr1:85198523-85198524
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:85198453..85200236-chr1:85200863..85203809,2	K562	blood:
2	chr1:85197216..85199232-chr1:85204194..85206731,2	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1057746	0.89[CHB][hapmap];0.82[JPT][hapmap];0.84[ASN][1000 genomes]
rs10874453	0.88[CHB][hapmap];0.81[JPT][hapmap]
rs10874454	0.87[CHB][hapmap];0.91[JPT][hapmap];0.84[ASN][1000 genomes]
rs11161435	1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[YRI][hapmap];0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11161436	1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[YRI][hapmap];0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11164031	0.84[ASN][1000 genomes]
rs11164032	0.88[CHB][hapmap];0.83[JPT][hapmap];0.84[ASN][1000 genomes]
rs11164033	0.84[ASN][1000 genomes]
rs11164034	0.89[CHB][hapmap];0.82[JPT][hapmap];0.87[ASN][1000 genomes]
rs11164036	0.90[ASN][1000 genomes]
rs11164041	0.93[ASN][1000 genomes]
rs11164048	0.86[YRI][hapmap]
rs12044089	0.82[ASN][1000 genomes]
rs12137124	0.89[CHB][hapmap];0.82[JPT][hapmap];0.86[YRI][hapmap];0.93[ASN][1000 genomes]
rs12730273	0.93[ASN][1000 genomes]
rs12736243	0.82[ASN][1000 genomes]
rs2911562	0.82[CHB][hapmap];0.82[JPT][hapmap]
rs2911564	0.81[CHB][hapmap]
rs2911566	0.84[CHB][hapmap];0.83[JPT][hapmap];0.80[ASN][1000 genomes]
rs3118466	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3768239	0.89[CHB][hapmap];0.88[JPT][hapmap];0.93[ASN][1000 genomes]
rs3768240	0.93[ASN][1000 genomes]
rs3768241	0.93[ASN][1000 genomes]
rs3768242	0.90[CHB][hapmap];0.83[JPT][hapmap];0.87[ASN][1000 genomes]
rs3768243	0.89[CHB][hapmap];0.82[JPT][hapmap];0.87[ASN][1000 genomes]
rs4537578	0.89[CHB][hapmap];0.82[JPT][hapmap];0.84[ASN][1000 genomes]
rs57636989	0.86[ASN][1000 genomes]
rs6681911	0.89[CHB][hapmap];0.82[JPT][hapmap];0.84[ASN][1000 genomes]
rs7524511	0.86[CHB][hapmap];0.85[JPT][hapmap];0.93[ASN][1000 genomes]
rs7550108	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs818524	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85190600-85199800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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