The 2.0 version of rSNPBase

Variant report

Variant rs2911565
Chromosome Location chr1:85129421-85129422
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85087000-85147400 Weak transcription Gastric stomach
2 chr1:85099200-85138200 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:85099400-85131200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:85106200-85140400 Weak transcription NHEK skin
5 chr1:85106400-85155400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:85108000-85155000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:85109200-85133000 Weak transcription Pancreas Pancrea
8 chr1:85111400-85131400 Weak transcription HSMM muscle
9 chr1:85111800-85152000 Weak transcription Aorta Aorta
10 chr1:85112400-85138200 Strong transcription K562 blood
11 chr1:85112600-85130600 Strong transcription iPS-20b Cell Line embryonic stem cell
12 chr1:85113000-85131200 Weak transcription Muscle Satellite Cultured Cells --
13 chr1:85113200-85138200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr1:85113400-85138200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:85114400-85130800 Weak transcription Ovary ovary
16 chr1:85114400-85139000 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr1:85114600-85130800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:85114800-85133000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr1:85114800-85134000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:85115400-85137800 Weak transcription Small Intestine intestine
21 chr1:85115800-85133800 Weak transcription Lung lung
22 chr1:85116200-85135400 Weak transcription HMEC breast
23 chr1:85116400-85134800 Weak transcription Brain Cingulate Gyrus brain
24 chr1:85117800-85137800 Weak transcription Psoas Muscle Psoas
25 chr1:85119200-85134600 Weak transcription Right Ventricle heart
26 chr1:85119400-85131400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:85119400-85136600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr1:85120600-85129600 Strong transcription HUES64 Cell Line embryonic stem cell
29 chr1:85120600-85134800 Strong transcription Fetal Intestine Large intestine
30 chr1:85121200-85129600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:85122600-85129600 Weak transcription HepG2 liver
32 chr1:85122800-85136000 Weak transcription Placenta Placenta
33 chr1:85123200-85130000 Strong transcription Primary B cells from cord blood blood
34 chr1:85123600-85139200 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr1:85123800-85137400 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:85123800-85140600 Weak transcription Brain Substantia Nigra brain
37 chr1:85124200-85129800 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr1:85124200-85131400 Weak transcription Osteobl bone
39 chr1:85124200-85137600 Weak transcription HSMMtube muscle
40 chr1:85124200-85137800 Weak transcription Esophagus oesophagus
41 chr1:85124400-85129600 Weak transcription NHDF-Ad bronchial
42 chr1:85124400-85130200 Weak transcription Fetal Muscle Trunk muscle
43 chr1:85124400-85131000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:85124400-85134600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:85124400-85138000 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr1:85124400-85144400 Weak transcription Rectal Smooth Muscle rectum
47 chr1:85124400-85145200 Weak transcription Fetal Brain Male brain
48 chr1:85124400-85149200 Weak transcription Brain Angular Gyrus brain
49 chr1:85124600-85135600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:85124600-85135600 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015