Variant report

Variant	rs2925173
Chromosome Location	chr5:114651864-114651865
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1455852	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1455853	0.93[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17137925	1.00[CHB][hapmap]
rs17472256	1.00[CHB][hapmap]
rs183842	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs2605174	0.81[ASN][1000 genomes]
rs2605182	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs267284	0.81[ASN][1000 genomes]
rs267285	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs267289	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs267291	1.00[MKK][hapmap]
rs2925174	0.88[ASN][1000 genomes]
rs7700478	1.00[CHB][hapmap]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:114651200-114652000	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr5:114651200-114652000	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr5:114651200-114652200	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr5:114651400-114652200	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr5:114651400-114652400	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr5:114651800-114652400	Enhancers	Brain Hippocampus Middle	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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