Variant report

Variant	rs2925174
Chromosome Location	chr5:114652184-114652185
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1455852	0.88[ASN][1000 genomes]
rs1455853	0.88[ASN][1000 genomes]
rs17137632	0.87[AMR][1000 genomes]
rs183842	0.81[ASN][1000 genomes]
rs2605174	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2605182	0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs267284	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs267285	0.81[ASN][1000 genomes]
rs267289	0.88[ASN][1000 genomes]
rs2925173	0.88[ASN][1000 genomes]
rs72815919	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72815924	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72815926	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72815929	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72815932	0.81[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:114651200-114652200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr5:114651400-114652200	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr5:114651400-114652400	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr5:114651800-114652400	Enhancers	Brain Hippocampus Middle	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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