Variant report

Variant rs2955381
Chromosome Location chr17:17945500-17945501
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17943600-17946200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr17:17943800-17946600 Enhancers Fetal Brain Male brain
3 chr17:17944000-17945600 Enhancers Colon Smooth Muscle Colon
4 chr17:17944000-17945800 Enhancers Brain Hippocampus Middle brain
5 chr17:17944000-17945800 Enhancers Brain Substantia Nigra brain
6 chr17:17944000-17948200 Weak transcription Aorta Aorta
7 chr17:17944000-17948200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr17:17944000-17974200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr17:17944000-17974200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr17:17944200-17945800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr17:17944200-17945800 Enhancers Brain Cingulate Gyrus brain
12 chr17:17944200-17945800 Enhancers Brain Inferior Temporal Lobe brain
13 chr17:17944200-17945800 Enhancers HMEC breast
14 chr17:17944200-17945800 Enhancers HSMM muscle
15 chr17:17944200-17946000 Enhancers K562 blood
16 chr17:17944200-17947000 Enhancers Fetal Heart heart
17 chr17:17944200-17947000 Enhancers Psoas Muscle Psoas
18 chr17:17944200-17947400 Weak transcription Fetal Intestine Small intestine
19 chr17:17944200-17948000 Weak transcription Thymus Thymus
20 chr17:17944200-17948400 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr17:17944200-17948400 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr17:17944200-17948400 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr17:17944200-17948600 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr17:17944200-17950400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr17:17944200-17956000 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr17:17944200-17957200 Weak transcription NH-A brain
27 chr17:17944200-17957400 Weak transcription H1 Cell Line embryonic stem cell
28 chr17:17944200-17957400 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr17:17944200-17974400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr17:17944400-17945800 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr17:17944400-17945800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr17:17944400-17945800 Enhancers Muscle Satellite Cultured Cells --
33 chr17:17944400-17945800 Enhancers Hela-S3 cervix
34 chr17:17944400-17945800 Enhancers Osteobl bone
35 chr17:17944400-17946200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr17:17944400-17946200 Enhancers Skeletal Muscle Male skeletal muscle
37 chr17:17944400-17946400 Enhancers Brain Angular Gyrus brain
38 chr17:17944400-17946600 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr17:17944400-17947000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr17:17944400-17947200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr17:17944400-17947400 Weak transcription Primary T cells from cord blood blood
42 chr17:17944400-17947400 Weak transcription Fetal Stomach stomach
43 chr17:17944400-17948200 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr17:17944400-17948400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr17:17944400-17948600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr17:17944400-17948800 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr17:17944400-17948800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr17:17944400-17948800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr17:17944400-17949400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr17:17944400-17949400 Weak transcription Colonic Mucosa Colon

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