Variant report

Variant rs8068175
Chromosome Location chr17:17874486-17874487
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17868800-17875000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr17:17869000-17874600 Weak transcription Lung lung
3 chr17:17869000-17875000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr17:17872200-17874600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr17:17873000-17874600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr17:17873400-17874600 Enhancers Small Intestine intestine
7 chr17:17873600-17874600 Enhancers Psoas Muscle Psoas
8 chr17:17873600-17874600 Enhancers Sigmoid Colon Sigmoid Colon
9 chr17:17873800-17874600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr17:17873800-17874600 Enhancers Primary T cells fromperipheralblood blood
11 chr17:17873800-17874600 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr17:17873800-17874600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
13 chr17:17873800-17874600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr17:17873800-17874600 Enhancers Liver Liver
15 chr17:17873800-17874600 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr17:17873800-17874600 Enhancers Rectal Mucosa Donor 31 rectum
17 chr17:17873800-17874600 Enhancers Thymus Thymus
18 chr17:17873800-17874800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr17:17873800-17874800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr17:17873800-17874800 Enhancers Primary monocytes fromperipheralblood blood
21 chr17:17873800-17875000 Flanking Active TSS Muscle Satellite Cultured Cells --
22 chr17:17873800-17875000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
23 chr17:17873800-17875000 Enhancers Spleen Spleen
24 chr17:17873800-17875200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
25 chr17:17873800-17875200 Flanking Active TSS Primary T cells from cord blood blood
26 chr17:17873800-17875200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
27 chr17:17873800-17875200 Flanking Active TSS Brain Cingulate Gyrus brain
28 chr17:17873800-17875200 Flanking Active TSS Brain Germinal Matrix brain
29 chr17:17873800-17875200 Flanking Active TSS Brain Substantia Nigra brain
30 chr17:17873800-17876400 Active TSS Esophagus oesophagus
31 chr17:17873800-17876600 Active TSS Right Atrium heart
32 chr17:17874000-17874600 Enhancers Placenta Amnion Placenta Amnion
33 chr17:17874000-17874600 Flanking Active TSS NHDF-Ad bronchial
34 chr17:17874000-17874800 Enhancers Primary hematopoietic stem cells blood
35 chr17:17874000-17874800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
36 chr17:17874000-17875000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr17:17874000-17875200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
38 chr17:17874000-17875200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr17:17874000-17875200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr17:17874000-17875200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
41 chr17:17874000-17875200 Flanking Active TSS Brain Hippocampus Middle brain
42 chr17:17874000-17875200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
43 chr17:17874000-17875200 Flanking Active TSS Fetal Brain Male brain
44 chr17:17874000-17875200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
45 chr17:17874000-17875200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
46 chr17:17874200-17874600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr17:17874200-17874600 Enhancers Primary neutrophils fromperipheralblood blood
48 chr17:17874200-17874600 Enhancers Colonic Mucosa Colon
49 chr17:17874200-17874600 Flanking Active TSS Fetal Kidney kidney
50 chr17:17874200-17874600 Flanking Active TSS Pancreatic Islets Pancreatic Islet

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