Variant report

Variant	rs2964596
Chromosome Location	chr5:151263922-151263923
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs10050657	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs10062169	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10078632	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10079787	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10463320	0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10476778	0.80[EUR][1000 genomes]
rs11167557	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11167559	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12108921	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12109022	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12109585	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12658422	0.81[EUR][1000 genomes]
rs1366238	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1428159	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1428160	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2033212	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2913878	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2913879	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2913881	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2913882	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2913888	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2913889	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2913892	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2913893	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2913894	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2964597	0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2964599	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2964601	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2964603	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2964604	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2964606	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35692301	0.81[EUR][1000 genomes]
rs4075273	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4076138	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4259159	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4331885	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4362933	0.80[EUR][1000 genomes]
rs4478307	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4541649	0.80[EUR][1000 genomes]
rs4555782	0.80[EUR][1000 genomes]
rs4594844	0.80[EUR][1000 genomes]
rs62394144	0.81[EUR][1000 genomes]
rs6579906	0.80[EUR][1000 genomes]
rs6579908	0.81[EUR][1000 genomes]
rs6579909	0.81[EUR][1000 genomes]
rs6863833	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6863837	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6868371	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6870491	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6878691	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6892117	0.89[ASN][1000 genomes]
rs6896518	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6896664	0.89[ASN][1000 genomes]
rs72802219	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7341167	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7702751	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7711609	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7711771	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7712779	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7725327	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7728956	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7729026	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9324712	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9324714	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151235200-151264200	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr5:151260800-151265200	Enhancers	Fetal Heart	heart

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