Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:69711521..69714226-chr8:69716539..69719497,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10089897	1.00[ASN][1000 genomes]
rs10090892	1.00[ASN][1000 genomes]
rs10096087	1.00[ASN][1000 genomes]
rs10109701	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11778752	1.00[CHB][hapmap]
rs11779221	1.00[ASN][1000 genomes]
rs17389034	1.00[CHB][hapmap]
rs17613697	1.00[ASN][1000 genomes]
rs28488124	1.00[ASN][1000 genomes]
rs28631008	1.00[ASN][1000 genomes]
rs28760971	1.00[ASN][1000 genomes]
rs28798408	1.00[ASN][1000 genomes]
rs2953963	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2978243	0.81[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2978246	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2978247	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4265200	1.00[ASN][1000 genomes]
rs6472428	1.00[ASN][1000 genomes]
rs6981271	1.00[ASN][1000 genomes]
rs6991004	1.00[ASN][1000 genomes]
rs7014621	1.00[ASN][1000 genomes]
rs73282699	1.00[ASN][1000 genomes]
rs7821207	1.00[ASN][1000 genomes]
rs7821581	1.00[ASN][1000 genomes]
rs7837124	1.00[CHB][hapmap]
rs7837210	1.00[ASN][1000 genomes]
rs7838741	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831349	chr8:69555461-69733515	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv465703	chr8:69641287-69814578	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv611462	chr8:69641287-69814578	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1017131	chr8:69676989-69792515	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69715000-69722400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:69718800-69719400	Enhancers	HMEC	breast
3	chr8:69718800-69719600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr8:69719000-69719600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:69719000-69719600	Enhancers	NHEK	skin
6	chr8:69719000-69720400	Enhancers	Fetal Lung	lung

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