Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:69740115..69742868-chr8:69748280..69750451,2	MCF-7	breast:
2	chr8:69729862..69732117-chr8:69739416..69741955,2	MCF-7	breast:
3	chr8:69739790..69742259-chr8:69942663..69944315,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10087739	1.00[ASN][1000 genomes]
rs10089897	1.00[ASN][1000 genomes]
rs10090892	1.00[ASN][1000 genomes]
rs10096087	1.00[ASN][1000 genomes]
rs10097876	1.00[CHB][hapmap]
rs10101263	1.00[CHB][hapmap]
rs10109701	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11778752	1.00[CHB][hapmap]
rs1317211	1.00[ASN][1000 genomes]
rs17389034	1.00[CHB][hapmap]
rs17613697	1.00[ASN][1000 genomes]
rs1863590	1.00[ASN][1000 genomes]
rs28488124	1.00[ASN][1000 genomes]
rs28631008	1.00[ASN][1000 genomes]
rs28760971	1.00[ASN][1000 genomes]
rs28798408	1.00[ASN][1000 genomes]
rs2953963	1.00[ASN][1000 genomes]
rs2978225	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2978243	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2978246	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2978247	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs41466649	1.00[ASN][1000 genomes]
rs4265200	1.00[ASN][1000 genomes]
rs60318345	1.00[ASN][1000 genomes]
rs6472428	1.00[ASN][1000 genomes]
rs6981271	1.00[ASN][1000 genomes]
rs6991004	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7014621	1.00[ASN][1000 genomes]
rs73282699	1.00[ASN][1000 genomes]
rs7459898	1.00[ASN][1000 genomes]
rs7821207	1.00[ASN][1000 genomes]
rs7821581	1.00[ASN][1000 genomes]
rs7837124	1.00[CHB][hapmap]
rs7837210	1.00[ASN][1000 genomes]
rs7838741	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv465703	chr8:69641287-69814578	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv611462	chr8:69641287-69814578	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1017131	chr8:69676989-69792515	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1031642	chr8:69728620-69814849	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv1033122	chr8:69728620-69843088	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv1018791	chr8:69729491-69814849	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69736000-69742200	Weak transcription	Fetal Brain Male	brain
2	chr8:69741400-69743200	Enhancers	Fetal Lung	lung
3	chr8:69741600-69742400	Enhancers	Colon Smooth Muscle	Colon
4	chr8:69741600-69742600	Enhancers	Hela-S3	cervix
5	chr8:69741600-69743200	Enhancers	Breast Myoepithelial Primary Cells	Breast

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