Variant report

Variant rs3129791
Chromosome Location chr6:28954293-28954294
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28948600-28954800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr6:28951000-28955800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr6:28951000-28956000 Weak transcription GM12878-XiMat blood
4 chr6:28952000-28954400 Active TSS ES-I3 Cell Line embryonic stem cell
5 chr6:28952000-28954400 Active TSS Brain Cingulate Gyrus brain
6 chr6:28953000-28954400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr6:28953200-28954400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
8 chr6:28953400-28955800 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr6:28953600-28954400 Enhancers Primary T helper cells PMA-I stimulated --
10 chr6:28953600-28954400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr6:28953800-28954400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:28953800-28954400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
13 chr6:28953800-28954400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
14 chr6:28953800-28954400 Enhancers Lung lung
15 chr6:28953800-28954400 Flanking Active TSS Hela-S3 cervix
16 chr6:28953800-28956400 Weak transcription Placenta Amnion Placenta Amnion
17 chr6:28954000-28954400 Bivalent Enhancer H1 Cell Line embryonic stem cell
18 chr6:28954000-28954400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr6:28954000-28954400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
20 chr6:28954000-28954400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
21 chr6:28954000-28954400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
22 chr6:28954000-28954400 Flanking Active TSS Brain Germinal Matrix brain
23 chr6:28954000-28954400 Enhancers Brain Substantia Nigra brain
24 chr6:28954000-28954400 Enhancers Fetal Muscle Trunk muscle
25 chr6:28954000-28954400 Enhancers Placenta Placenta
26 chr6:28954000-28954400 Enhancers Pancreas Pancrea
27 chr6:28954000-28954800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr6:28954000-28955200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr6:28954000-28955800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr6:28954000-28955800 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr6:28954000-28956000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr6:28954000-28956000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr6:28954000-28956000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr6:28954000-28956000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr6:28954000-28956000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr6:28954000-28956000 Weak transcription Muscle Satellite Cultured Cells --
37 chr6:28954000-28956000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr6:28954000-28956000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr6:28954000-28956000 Weak transcription Colon Smooth Muscle Colon
40 chr6:28954000-28956000 Weak transcription Duodenum Mucosa Duodenum
41 chr6:28954000-28956000 Weak transcription Psoas Muscle Psoas
42 chr6:28954000-28956000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr6:28954000-28956000 Weak transcription HSMM muscle
44 chr6:28954000-28956000 Weak transcription HUVEC blood vessel
45 chr6:28954000-28956000 Weak transcription NH-A brain
46 chr6:28954000-28956000 Weak transcription NHLF lung
47 chr6:28954000-28956200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr6:28954000-28956200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr6:28954000-28956200 Weak transcription Esophagus oesophagus
50 chr6:28954000-28956200 Weak transcription Gastric stomach

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