Variant report
| Variant | rs3131096 |
|---|---|
| Chromosome Location | chr6:28852451-28852452 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:28849400-28863000 | Weak transcription | Right Atrium | heart |
| 2 | chr6:28851000-28852800 | Weak transcription | HepG2 | liver |
| 3 | chr6:28851800-28852800 | Bivalent/Poised TSS | Primary B cells from cord blood | blood |
| 4 | chr6:28851800-28852800 | Active TSS | GM12878-XiMat | blood |
| 5 | chr6:28851800-28853000 | Flanking Active TSS | Dnd41 | blood |
| 6 | chr6:28851800-28853400 | Bivalent Enhancer | Primary B cells from peripheral blood | blood |
| 7 | chr6:28852000-28852600 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 8 | chr6:28852000-28852600 | Bivalent/Poised TSS | Rectal Mucosa Donor 29 | rectum |
| 9 | chr6:28852000-28853000 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 10 | chr6:28852000-28853200 | Flanking Active TSS | Primary T cells fromperipheralblood | blood |
| 11 | chr6:28852000-28853200 | Flanking Bivalent TSS/Enh | Monocytes-CD14+_RO01746 | blood |
| 12 | chr6:28852200-28852800 | Active TSS | Primary T killer memory cells from peripheral blood | blood |
| 13 | chr6:28852200-28853000 | Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 14 | chr6:28852200-28853000 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 15 | chr6:28852200-28853200 | Active TSS | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 16 | chr6:28852200-28853200 | Active TSS | Duodenum Mucosa | Duodenum |
| 17 | chr6:28852200-28853400 | Active TSS | Primary T regulatory cells fromperipheralblood | blood |
| 18 | chr6:28852400-28852600 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 19 | chr6:28852400-28852600 | Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
| 20 | chr6:28852400-28852600 | Active TSS | Primary T helper cells fromperipheralblood | blood |
| 21 | chr6:28852400-28852600 | Flanking Active TSS | Thymus | Thymus |
| 22 | chr6:28852400-28852800 | Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 23 | chr6:28852400-28852800 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 24 | chr6:28852400-28852800 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 25 | chr6:28852400-28853000 | Enhancers | Primary hematopoietic stem cells | blood |
| 26 | chr6:28852400-28853000 | Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 27 | chr6:28852400-28853200 | Bivalent Enhancer | Primary monocytes fromperipheralblood | blood |
| 28 | chr6:28852400-28853200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 29 | chr6:28852400-28853200 | Active TSS | Primary T killer naive cells fromperipheralblood | blood |
| 30 | chr6:28852400-28853400 | Enhancers | Primary T cells from cord blood | blood |
| 31 | chr6:28852400-28853400 | Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 32 | chr6:28852400-28854200 | ZNF genes & repeats | Fetal Thymus | thymus |
