Variant report

Variant rs3131336
Chromosome Location chr6:28831611-28831612
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28830400-28832200 Active TSS Hela-S3 cervix
2 chr6:28830400-28833000 Active TSS Fetal Brain Female brain
3 chr6:28830600-28832200 Active TSS HUES64 Cell Line embryonic stem cell
4 chr6:28830600-28832200 Active TSS Brain Anterior Caudate brain
5 chr6:28830600-28832200 Active TSS Brain Cingulate Gyrus brain
6 chr6:28830600-28834800 Active TSS A549 lung
7 chr6:28830800-28832200 Active TSS iPS-15b Cell Line embryonic stem cell
8 chr6:28830800-28832200 Active TSS iPS-20b Cell Line embryonic stem cell
9 chr6:28830800-28832200 Bivalent/Poised TSS Brain Germinal Matrix brain
10 chr6:28830800-28832200 Active TSS Brain Substantia Nigra brain
11 chr6:28830800-28832400 Active TSS ES-I3 Cell Line embryonic stem cell
12 chr6:28830800-28832400 Active TSS H9 Cell Line embryonic stem cell
13 chr6:28830800-28832400 Active TSS HUES6 Cell Line embryonic stem cell
14 chr6:28830800-28832400 Active TSS Fetal Brain Male brain
15 chr6:28830800-28832600 Active TSS ES-WA7 Cell Line embryonic stem cell
16 chr6:28830800-28832600 Active TSS Brain Inferior Temporal Lobe brain
17 chr6:28831000-28832000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr6:28831000-28832000 Active TSS Primary T helper cells PMA-I stimulated --
19 chr6:28831000-28832000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
20 chr6:28831000-28832000 Active TSS Fetal Adrenal Gland Adrenal Gland
21 chr6:28831000-28832000 Active TSS Rectal Mucosa Donor 29 rectum
22 chr6:28831000-28832200 Active TSS H1 Cell Line embryonic stem cell
23 chr6:28831000-28832200 Active TSS HUES48 Cell Line embryonic stem cell
24 chr6:28831000-28832200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr6:28831000-28832200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
26 chr6:28831000-28832200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr6:28831000-28832200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr6:28831000-28832200 Active TSS Brain Hippocampus Middle brain
29 chr6:28831000-28832200 Active TSS Duodenum Mucosa Duodenum
30 chr6:28831000-28832200 Active TSS HSMM muscle
31 chr6:28831000-28832200 Active TSS NHLF lung
32 chr6:28831000-28832400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
33 chr6:28831000-28832400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
34 chr6:28831000-28832400 Active TSS HSMMtube muscle
35 chr6:28831000-28832600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr6:28831000-28832600 Flanking Active TSS Primary T cells fromperipheralblood blood
37 chr6:28831000-28832600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
38 chr6:28831000-28832600 Active TSS Duodenum Smooth Muscle Duodenum
39 chr6:28831000-28834800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
40 chr6:28831000-28835000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr6:28831200-28831800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
42 chr6:28831200-28831800 Active TSS Adipose Nuclei Adipose
43 chr6:28831200-28831800 Active TSS Fetal Muscle Trunk muscle
44 chr6:28831200-28832000 Active TSS NH-A brain
45 chr6:28831200-28832200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
46 chr6:28831200-28832200 Active TSS Primary T cells from cord blood blood
47 chr6:28831200-28832200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
48 chr6:28831200-28832200 Active TSS Primary T killer naive cells fromperipheralblood blood
49 chr6:28831200-28832200 Active TSS Brain Angular Gyrus brain
50 chr6:28831200-28832200 Active TSS Colon Smooth Muscle Colon

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