Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:110749174..110750778-chr8:110751641..110754082,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs3102253	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3102254	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3108845	0.88[ASN][1000 genomes]
rs3108848	0.89[ASN][1000 genomes]
rs3108858	0.80[ASN][1000 genomes]
rs3108859	0.80[ASN][1000 genomes]
rs3108872	0.89[ASN][1000 genomes]
rs3108874	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3108875	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3133943	0.89[ASN][1000 genomes]
rs3133945	0.89[ASN][1000 genomes]
rs3133949	0.90[CHB][hapmap];0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs3133962	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3133963	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3133965	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3133966	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3133968	0.80[ASN][1000 genomes]
rs3134342	0.82[ASN][1000 genomes]
rs35327785	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4515520	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs3133969	PKHD1L1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110747400-110754600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:110750400-110753600	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr8:110750400-110754000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr8:110750800-110754200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr8:110750800-110757200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr8:110750800-110757400	Weak transcription	HMEC	breast
7	chr8:110750800-110757600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:110752400-110753200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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