Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1484018	0.80[ASN][1000 genomes]
rs28630401	0.80[ASN][1000 genomes]
rs28689139	0.80[ASN][1000 genomes]
rs3102250	0.80[ASN][1000 genomes]
rs3102252	0.80[ASN][1000 genomes]
rs3102253	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3102254	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3108845	0.86[ASN][1000 genomes]
rs3108848	0.88[ASN][1000 genomes]
rs3108872	0.88[ASN][1000 genomes]
rs3108874	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3108875	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3133943	0.88[ASN][1000 genomes]
rs3133945	0.88[ASN][1000 genomes]
rs3133949	0.88[ASN][1000 genomes]
rs3133962	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3133963	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3133965	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3133966	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3133969	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3133971	0.80[ASN][1000 genomes]
rs3134342	0.80[ASN][1000 genomes]
rs35327785	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4515520	PKHD1L1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110750800-110757200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr8:110750800-110757400	Weak transcription	HMEC	breast
3	chr8:110750800-110757600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr8:110753200-110756000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr8:110754400-110757600	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr8:110755800-110756800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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