The 2.0 version of rSNPBase

Variant report

Variant rs3136563
Chromosome Location chr12:9915445-9915446
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9903400-9917600 Weak transcription H1 Cell Line embryonic stem cell
2 chr12:9913000-9916000 Enhancers Primary monocytes fromperipheralblood blood
3 chr12:9913800-9917600 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr12:9914000-9916800 Weak transcription Duodenum Mucosa Duodenum
5 chr12:9914200-9915600 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr12:9914200-9917000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr12:9914200-9917000 Weak transcription HUVEC blood vessel
8 chr12:9914200-9917400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
9 chr12:9914200-9917800 Enhancers Primary T killer memory cells from peripheral blood blood
10 chr12:9914200-9918600 Enhancers Primary B cells from peripheral blood blood
11 chr12:9914400-9917000 Enhancers Primary B cells from cord blood blood
12 chr12:9914400-9917400 Enhancers Primary T cells fromperipheralblood blood
13 chr12:9914400-9918400 Enhancers Primary hematopoietic stem cells short term culture blood
14 chr12:9914400-9918600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr12:9914600-9915600 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr12:9914600-9917000 Enhancers Monocytes-CD14+_RO01746 blood
17 chr12:9914600-9917800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr12:9914600-9918400 Enhancers Fetal Thymus thymus
19 chr12:9914600-9918600 Enhancers Primary T helper cells fromperipheralblood blood
20 chr12:9914600-9920200 Enhancers Primary T cells from cord blood blood
21 chr12:9914800-9916600 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr12:9914800-9916600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr12:9914800-9916800 Enhancers Primary T regulatory cells fromperipheralblood blood
24 chr12:9914800-9916800 Enhancers Thymus Thymus
25 chr12:9914800-9918600 Enhancers Primary hematopoietic stem cells blood
26 chr12:9915000-9915600 ZNF genes & repeats K562 blood
27 chr12:9915000-9916800 Enhancers Dnd41 blood
28 chr12:9915200-9916200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr12:9915200-9916200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr12:9915200-9916600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr12:9915200-9916800 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr12:9915400-9915600 Weak transcription GM12878-XiMat blood
33 chr12:9915400-9916400 Enhancers Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015