Variant report

Variant rs3136687
Chromosome Location chr17:38717896-38717897
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38709000-38718200 Enhancers Primary hematopoietic stem cells blood
2 chr17:38713800-38719600 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr17:38714400-38721000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr17:38715000-38718200 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
5 chr17:38715000-38721400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
6 chr17:38715400-38718200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr17:38715400-38721800 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
8 chr17:38715600-38721600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
9 chr17:38716000-38719600 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
10 chr17:38716000-38720600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
11 chr17:38716200-38718600 Enhancers A549 lung
12 chr17:38716200-38720800 Flanking Active TSS Primary B cells from cord blood blood
13 chr17:38716400-38718600 Flanking Active TSS Fetal Thymus thymus
14 chr17:38716400-38720000 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
15 chr17:38716400-38722000 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
16 chr17:38716600-38718600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr17:38716600-38719600 Active TSS Primary T cells from cord blood blood
18 chr17:38716600-38720000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr17:38716600-38720800 Weak transcription H9 Cell Line embryonic stem cell
20 chr17:38716600-38721400 Weak transcription H1 Cell Line embryonic stem cell
21 chr17:38716800-38718200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
22 chr17:38717000-38719000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
23 chr17:38717000-38719600 Weak transcription Placenta Amnion Placenta Amnion
24 chr17:38717000-38720600 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr17:38717000-38721000 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr17:38717000-38721000 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr17:38717000-38721400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr17:38717000-38721800 Active TSS Rectal Mucosa Donor 29 rectum
29 chr17:38717200-38718200 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr17:38717200-38718200 Weak transcription Small Intestine intestine
31 chr17:38717200-38718400 Weak transcription Rectal Smooth Muscle rectum
32 chr17:38717200-38718600 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr17:38717200-38720400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr17:38717200-38720600 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr17:38717200-38721000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr17:38717200-38721000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr17:38717400-38718200 Transcr. at gene 5' and 3' Primary T killer naive cells fromperipheralblood blood
38 chr17:38717400-38718400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
39 chr17:38717400-38718800 Enhancers Duodenum Mucosa Duodenum
40 chr17:38717400-38719600 Flanking Active TSS GM12878-XiMat blood
41 chr17:38717600-38718000 Enhancers NH-A brain
42 chr17:38717600-38718000 Enhancers Osteobl bone
43 chr17:38717600-38718600 Weak transcription Esophagus oesophagus
44 chr17:38717600-38718600 Bivalent Enhancer HepG2 liver
45 chr17:38717600-38719000 Weak transcription Lung lung
46 chr17:38717600-38721000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr17:38717800-38718000 Bivalent Enhancer K562 blood
48 chr17:38717800-38718200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
49 chr17:38717800-38719000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
50 chr17:38717800-38719200 Enhancers Adipose Nuclei Adipose

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