The 2.0 version of rSNPBase

Variant report

Variant rs34069418
Chromosome Location chr6:35002268-35002269
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:34939400-35016000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr6:34963600-35006600 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr6:34986200-35015000 Weak transcription Primary B cells from peripheral blood blood
4 chr6:34986400-35011800 Weak transcription Dnd41 blood
5 chr6:34986800-35014800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr6:34987000-35009000 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr6:34987000-35015800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr6:34987400-35015800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr6:34989000-35002800 Weak transcription Fetal Thymus thymus
10 chr6:34990800-35002800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr6:34992800-35011800 Weak transcription Brain Germinal Matrix brain
12 chr6:34993400-35002600 Weak transcription Small Intestine intestine
13 chr6:34993800-35006000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr6:34993800-35014600 Weak transcription Fetal Brain Male brain
15 chr6:34994000-35002400 Weak transcription Muscle Satellite Cultured Cells --
16 chr6:34994200-35004000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr6:34994200-35014400 Weak transcription NHLF lung
18 chr6:34994400-35003200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr6:34994400-35005400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr6:34994600-35036000 Weak transcription K562 blood
21 chr6:34995000-35002400 Weak transcription H9 Cell Line embryonic stem cell
22 chr6:34995000-35005600 Weak transcription Osteobl bone
23 chr6:34995000-35005800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr6:34995000-35013800 Weak transcription Hela-S3 cervix
25 chr6:34995200-35003400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:34995400-35002400 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr6:34995600-35002600 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr6:34995600-35002800 Weak transcription H1 Cell Line embryonic stem cell
29 chr6:34995600-35003800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr6:34996000-35002800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr6:34996000-35015200 Weak transcription Primary T cells fromperipheralblood blood
32 chr6:34996200-35002600 Weak transcription Pancreas Pancrea
33 chr6:34996200-35002600 Weak transcription Psoas Muscle Psoas
34 chr6:34996200-35005400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr6:34996200-35010000 Weak transcription Ovary ovary
36 chr6:34996800-35003400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr6:34997800-35002600 Enhancers Rectal Smooth Muscle rectum
38 chr6:34997800-35004800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr6:34998200-35002400 Weak transcription HSMM muscle
40 chr6:34998400-35002600 Strong transcription Primary T cells from cord blood blood
41 chr6:34998600-35002600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr6:34998600-35002800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr6:34998600-35008000 Weak transcription Brain Angular Gyrus brain
44 chr6:34998800-35002400 Weak transcription Brain Substantia Nigra brain
45 chr6:34998800-35002600 Strong transcription Fetal Muscle Trunk muscle
46 chr6:34998800-35004400 Enhancers Sigmoid Colon Sigmoid Colon
47 chr6:34999000-35005600 Enhancers Duodenum Smooth Muscle Duodenum
48 chr6:34999000-35008600 Weak transcription Primary B cells from cord blood blood
49 chr6:34999200-35003400 Weak transcription Brain Hippocampus Middle brain
50 chr6:34999400-35007400 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015