Variant report

Variant rs820083
Chromosome Location chr6:35029799-35029800
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:34994600-35036000 Weak transcription K562 blood
2 chr6:35015800-35044200 Weak transcription HMEC breast
3 chr6:35016200-35055000 Weak transcription Hela-S3 cervix
4 chr6:35017600-35036200 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr6:35017800-35053000 Weak transcription Small Intestine intestine
6 chr6:35018400-35052800 Weak transcription Fetal Kidney kidney
7 chr6:35018600-35051000 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr6:35018800-35038200 Strong transcription Duodenum Mucosa Duodenum
9 chr6:35018800-35060600 Strong transcription Primary neutrophils fromperipheralblood blood
10 chr6:35020000-35059800 Strong transcription Fetal Intestine Small intestine
11 chr6:35020200-35037600 Strong transcription Fetal Intestine Large intestine
12 chr6:35020400-35059400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
13 chr6:35020600-35034800 Strong transcription Primary T cells from cord blood blood
14 chr6:35021000-35037000 Strong transcription Primary monocytes fromperipheralblood blood
15 chr6:35021000-35037600 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr6:35021200-35034800 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr6:35021400-35036200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr6:35021400-35037400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr6:35021600-35036800 Strong transcription Colonic Mucosa Colon
20 chr6:35021800-35055400 Weak transcription HSMM muscle
21 chr6:35022000-35034800 Strong transcription Rectal Mucosa Donor 31 rectum
22 chr6:35022000-35036600 Strong transcription Placenta Placenta
23 chr6:35022400-35036200 Strong transcription Pancreas Pancrea
24 chr6:35022600-35037200 Strong transcription Gastric stomach
25 chr6:35023000-35033200 Weak transcription Aorta Aorta
26 chr6:35024000-35039200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:35024400-35031200 Strong transcription Esophagus oesophagus
28 chr6:35024600-35034800 Strong transcription Ovary ovary
29 chr6:35024600-35035400 Strong transcription Sigmoid Colon Sigmoid Colon
30 chr6:35024800-35062000 Weak transcription A549 lung
31 chr6:35025200-35037400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr6:35025400-35030600 Weak transcription HUVEC blood vessel
33 chr6:35025600-35056000 Strong transcription Liver Liver
34 chr6:35025800-35031400 Strong transcription Skeletal Muscle Female skeletal muscle
35 chr6:35025800-35035400 Strong transcription HSMMtube muscle
36 chr6:35026000-35031000 Weak transcription Fetal Heart heart
37 chr6:35026000-35032200 Genic enhancers Adipose Nuclei Adipose
38 chr6:35026200-35029800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr6:35026400-35030400 Strong transcription Lung lung
40 chr6:35026400-35030600 Weak transcription Right Atrium heart
41 chr6:35026400-35034600 Strong transcription HUES6 Cell Line embryonic stem cell
42 chr6:35026400-35036000 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr6:35026400-35036400 Strong transcription Fetal Stomach stomach
44 chr6:35026600-35059200 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr6:35027200-35029800 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr6:35027200-35031000 Strong transcription Primary T cells fromperipheralblood blood
47 chr6:35027400-35030200 Strong transcription Brain Anterior Caudate brain
48 chr6:35027400-35030600 Strong transcription Brain Cingulate Gyrus brain
49 chr6:35027400-35032400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr6:35027600-35030000 Strong transcription HepG2 liver

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