Variant report

Variant	rs34169450
Chromosome Location	chr2:114589354-114589355
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11684493	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11695436	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12995205	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13020510	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13025971	0.83[EUR][1000 genomes]
rs13026880	0.83[EUR][1000 genomes]
rs1949722	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34775317	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35392321	0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35893878	0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35905948	0.83[EUR][1000 genomes]
rs4544443	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60022746	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6739861	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs71416564	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs71416565	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs74182871	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7590041	0.80[ASN][1000 genomes]
rs7591643	0.83[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114574200-114603600	Weak transcription	Primary B cells from cord blood	blood
2	chr2:114584600-114595600	Weak transcription	HepG2	liver
3	chr2:114584800-114592000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr2:114586400-114591400	Weak transcription	Fetal Intestine Large	intestine
5	chr2:114586400-114601000	Weak transcription	Primary T cells from cord blood	blood
6	chr2:114587800-114590800	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr2:114589000-114591400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr2:114589200-114590000	Enhancers	Placenta	Placenta
9	chr2:114589200-114592000	Weak transcription	HMEC	breast
10	chr2:114589200-114596400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr2:114589200-114600200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr2:114589200-114600200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr2:114589200-114600200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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