Variant report

Variant	rs35392321
Chromosome Location	chr2:114580245-114580246
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11684493	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11695436	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12995205	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13020510	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13025971	0.84[EUR][1000 genomes]
rs13026880	0.84[EUR][1000 genomes]
rs1949722	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34169450	0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34775317	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35893878	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35905948	0.84[EUR][1000 genomes]
rs4544443	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs60022746	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6739861	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs71416564	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs71416565	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs74182871	0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7590041	0.81[ASN][1000 genomes]
rs7591643	0.84[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114568200-114586000	Weak transcription	Primary T cells from cord blood	blood
2	chr2:114574200-114603600	Weak transcription	Primary B cells from cord blood	blood
3	chr2:114576400-114582800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr2:114576400-114588400	Weak transcription	Esophagus	oesophagus
5	chr2:114577000-114583800	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr2:114577200-114582200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr2:114577200-114584600	Weak transcription	Fetal Intestine Small	intestine
8	chr2:114578000-114581400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr2:114578200-114582200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr2:114579400-114580400	Enhancers	K562	blood
11	chr2:114579400-114581000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr2:114579800-114580400	Enhancers	NHDF-Ad	bronchial
13	chr2:114579800-114580600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr2:114580000-114580400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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