Variant report

Variant	rs74182871
Chromosome Location	chr2:114599535-114599536
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11684493	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11686283	0.81[EUR][1000 genomes]
rs11695436	0.88[EUR][1000 genomes]
rs12995205	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13020510	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13025971	0.83[EUR][1000 genomes]
rs13026880	0.83[EUR][1000 genomes]
rs1949722	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34169450	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34775317	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35392321	0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35893878	0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35905948	0.83[EUR][1000 genomes]
rs4544443	0.83[EUR][1000 genomes]
rs60022746	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6739861	0.93[EUR][1000 genomes]
rs71416564	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs71416565	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7591643	0.83[EUR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114574200-114603600	Weak transcription	Primary B cells from cord blood	blood
2	chr2:114586400-114601000	Weak transcription	Primary T cells from cord blood	blood
3	chr2:114589200-114600200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr2:114589200-114600200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr2:114589200-114600200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr2:114596400-114621000	Weak transcription	Aorta	Aorta
7	chr2:114596600-114603400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr2:114596600-114611600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr2:114596800-114632800	Weak transcription	Primary T helper cells fromperipheralblood	blood
10	chr2:114597400-114600200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr2:114597600-114631400	Weak transcription	Primary T helper cells PMA-I stimulated	--
12	chr2:114598200-114600800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr2:114599200-114600000	Weak transcription	NHDF-Ad	bronchial
14	chr2:114599200-114600200	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr2:114599200-114600400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr2:114599200-114600400	Weak transcription	HUES64 Cell Line	embryonic stem cell
17	chr2:114599400-114599600	Enhancers	Placenta	Placenta

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links