Variant report

Variant	rs34295748
Chromosome Location	chr10:18470126-18470127
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11598236	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12569914	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12571593	0.88[AMR][1000 genomes]
rs12765240	0.88[AMR][1000 genomes]
rs12766683	0.92[EUR][1000 genomes]
rs12776808	0.97[EUR][1000 genomes]
rs17605553	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17662228	0.88[AMR][1000 genomes]
rs1779241	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1779244	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2482101	0.82[EUR][1000 genomes]
rs2482103	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2489211	0.80[EUR][1000 genomes]
rs34074414	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs34537345	0.93[EUR][1000 genomes]
rs35118097	0.94[ASN][1000 genomes]
rs35410995	0.82[ASN][1000 genomes]
rs35667846	0.97[EUR][1000 genomes]
rs35769984	0.82[AMR][1000 genomes]
rs71491145	0.86[EUR][1000 genomes]
rs71497236	0.88[AMR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18467200-18470200	Enhancers	Fetal Stomach	stomach
2	chr10:18467600-18471200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr10:18467600-18471200	Enhancers	Ovary	ovary
4	chr10:18468400-18486000	Weak transcription	Fetal Intestine Large	intestine
5	chr10:18469000-18470200	Enhancers	Right Atrium	heart
6	chr10:18469000-18486000	Weak transcription	Aorta	Aorta
7	chr10:18469200-18486000	Weak transcription	Fetal Intestine Small	intestine
8	chr10:18469400-18470200	Enhancers	Duodenum Smooth Muscle	Duodenum
9	chr10:18469400-18470200	Enhancers	Pancreatic Islets	Pancreatic Islet
10	chr10:18469400-18470400	Enhancers	Colon Smooth Muscle	Colon
11	chr10:18469400-18474400	Weak transcription	Brain Angular Gyrus	brain
12	chr10:18469400-18479000	Weak transcription	Right Ventricle	heart
13	chr10:18469400-18491200	Weak transcription	Primary hematopoietic stem cells	blood
14	chr10:18469600-18470400	Enhancers	Fetal Heart	heart
15	chr10:18469600-18470800	Weak transcription	Fetal Lung	lung
16	chr10:18469600-18471200	Enhancers	Rectal Smooth Muscle	rectum
17	chr10:18469600-18472200	Enhancers	Stomach Smooth Muscle	stomach
18	chr10:18469600-18472400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr10:18469600-18473600	Weak transcription	Pancreas	Pancrea
20	chr10:18469600-18474600	Weak transcription	Brain Inferior Temporal Lobe	brain
21	chr10:18469600-18474800	Weak transcription	Brain Substantia Nigra	brain
22	chr10:18469600-18483200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr10:18469600-18486000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr10:18469800-18471000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr10:18469800-18471200	Weak transcription	Cortex derived primary cultured neurospheres	brain
26	chr10:18469800-18479200	Weak transcription	Left Ventricle	heart

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