Variant report

Variant	rs34408954
Chromosome Location	chr19:20984317-20984318
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 143 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:72)

rs_ID	r²[population]
rs12972757	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12973946	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12974516	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12977377	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12978422	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12980702	0.81[EUR][1000 genomes]
rs12982799	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12982946	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12983625	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12984683	0.90[EUR][1000 genomes]
rs12984979	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12985632	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12985960	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34044414	0.84[EUR][1000 genomes]
rs34094278	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs34147545	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34215623	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34319995	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs34333465	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs34353115	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs34420848	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34428650	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34570925	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34589343	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34624594	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34655445	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34677147	0.84[EUR][1000 genomes]
rs34715629	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34883359	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35142954	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35187472	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35301331	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs35355399	0.81[EUR][1000 genomes]
rs35360342	0.84[EUR][1000 genomes]
rs35410563	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35431492	0.84[EUR][1000 genomes]
rs35629911	0.84[EUR][1000 genomes]
rs35713135	0.81[EUR][1000 genomes]
rs35713726	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35739003	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35739216	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35775609	0.85[EUR][1000 genomes]
rs35816744	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs35891780	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs36066016	0.81[EUR][1000 genomes]
rs36116339	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs3853666	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs3853667	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4583391	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs66746089	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs66886362	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs66889224	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs67048847	0.84[EUR][1000 genomes]
rs67084493	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs67143565	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67242454	0.84[EUR][1000 genomes]
rs67493653	0.81[EUR][1000 genomes]
rs68066643	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs68140009	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7254676	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73005097	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73007025	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73007030	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73007042	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs74182991	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs74182996	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs74182998	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs74182999	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs74183002	0.81[EUR][1000 genomes]
rs8100072	0.81[EUR][1000 genomes]
rs8113635	0.81[EUR][1000 genomes]
rs9749521	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:71 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv911325	chr19:20151257-21071548	ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	49 gene(s)	inside rSNPs	diseases
2	nsv530804	chr19:20574295-21001349	Weak transcription Strong transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
3	esv2751781	chr19:20818886-20985425	ZNF genes & repeats Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv578921	chr19:20818886-20985425	ZNF genes & repeats Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv458510	chr19:20818886-20987550	Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	nsv578910	chr19:20818886-20987550	Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Active TSS Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
7	nsv578917	chr19:20818886-20989873	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
8	nsv578918	chr19:20818886-21008212	ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
9	esv3447275	chr19:20818886-21030779	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
10	esv2752729	chr19:20818886-21169554	ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
11	nsv1062776	chr19:20818886-21273361	Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
12	nsv932110	chr19:20818886-21278952	Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
13	esv2763043	chr19:20818886-21290543	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
14	esv2751782	chr19:20845947-20985460	ZNF genes & repeats Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
15	nsv1066747	chr19:20845947-20985924	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
16	nsv1060429	chr19:20845947-20986303	ZNF genes & repeats Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
17	nsv1060579	chr19:20845947-20986303	Weak transcription Strong transcription ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
18	nsv1061028	chr19:20845947-20986303	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
19	nsv1061596	chr19:20845947-20986303	Active TSS Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
20	nsv1062051	chr19:20845947-20986303	Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
21	nsv1063760	chr19:20845947-20986303	Active TSS Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
22	nsv1066131	chr19:20845947-20986303	Strong transcription Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
23	esv3693420	chr19:20845947-20987550	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
24	nsv517256	chr19:20845947-20987550	Strong transcription ZNF genes & repeats Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
25	nsv458514	chr19:20845947-20987550	Active TSS ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
26	nsv458515	chr19:20845947-20987550	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
27	nsv458516	chr19:20845947-20987550	Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
28	nsv458517	chr19:20845947-20987550	Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
29	nsv458519	chr19:20845947-20987550	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
30	nsv458520	chr19:20845947-20987550	Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
31	nsv458521	chr19:20845947-20987550	ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
32	nsv458522	chr19:20845947-20987550	Bivalent Enhancer ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
33	nsv458523	chr19:20845947-20987550	ZNF genes & repeats Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
34	nsv578923	chr19:20845947-20987550	Strong transcription Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
35	nsv578931	chr19:20845947-20987550	ZNF genes & repeats Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
36	nsv578925	chr19:20845947-20989873	Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
37	nsv578927	chr19:20845947-20989873	ZNF genes & repeats Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
38	nsv578932	chr19:20845947-20989873	Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
39	nsv578937	chr19:20845947-20989873	Strong transcription ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
40	nsv578924	chr19:20845947-20990455	Active TSS Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
41	nsv578928	chr19:20845947-20990455	Weak transcription Active TSS ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
42	nsv578933	chr19:20845947-20990455	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
43	nsv578938	chr19:20845947-20990455	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
44	nsv1065615	chr19:20845947-20997025	Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
45	nsv1056551	chr19:20845947-20997977	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
46	nsv578934	chr19:20845947-21001176	Active TSS ZNF genes & repeats Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
47	nsv911409	chr19:20845947-21001176	ZNF genes & repeats Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
48	esv3338155	chr19:20845947-21015656	Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
49	esv3319109	chr19:20845947-21015695	Strong transcription ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
50	esv3319110	chr19:20845947-21015695	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:20960000-20987600	Weak transcription	Brain Substantia Nigra	brain
2	chr19:20960000-20987800	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr19:20960200-20987200	Weak transcription	Colon Smooth Muscle	Colon
4	chr19:20960200-20990400	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr19:20961200-20989600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr19:20966400-20985400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr19:20974800-20992000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr19:20975200-20984800	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr19:20975200-20989400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
10	chr19:20975200-20992000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
11	chr19:20975600-20984400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr19:20975600-20984800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
13	chr19:20975600-20985400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr19:20975600-20989200	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
15	chr19:20976400-20985000	ZNF genes & repeats	Fetal Lung	lung
16	chr19:20976600-20990800	ZNF genes & repeats	Dnd41	blood
17	chr19:20976800-20990800	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
18	chr19:20977000-20991200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
19	chr19:20977600-20991000	ZNF genes & repeats	Primary T cells from cord blood	blood
20	chr19:20977800-20984400	ZNF genes & repeats	Fetal Brain Female	brain
21	chr19:20977800-20990200	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
22	chr19:20978200-20984800	ZNF genes & repeats	Primary mononuclear cells fromperipheralblood	Blood
23	chr19:20978400-20985000	ZNF genes & repeats	Adipose Nuclei	Adipose
24	chr19:20978400-20991200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
25	chr19:20978800-20987600	Weak transcription	Brain Inferior Temporal Lobe	brain
26	chr19:20979000-20984400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr19:20979000-20985600	Weak transcription	Stomach Smooth Muscle	stomach
28	chr19:20979000-20987200	Weak transcription	Brain Cingulate Gyrus	brain
29	chr19:20979200-20984800	Weak transcription	Fetal Muscle Trunk	muscle
30	chr19:20979800-20987600	Weak transcription	Skeletal Muscle Female	skeletal muscle
31	chr19:20980000-20984600	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
32	chr19:20980200-20984800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
33	chr19:20981200-20991400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr19:20981600-20984400	Weak transcription	Colonic Mucosa	Colon
35	chr19:20982000-20987000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
36	chr19:20982200-20985800	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
37	chr19:20982600-20984800	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr19:20982800-20984600	ZNF genes & repeats	Rectal Mucosa Donor 29	rectum
39	chr19:20982800-20984800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
40	chr19:20982800-20984800	ZNF genes & repeats	Brain Germinal Matrix	brain
41	chr19:20982800-20984800	ZNF genes & repeats	Small Intestine	intestine
42	chr19:20982800-20985000	ZNF genes & repeats	Primary B cells from peripheral blood	blood
43	chr19:20982800-20985400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
44	chr19:20982800-20990800	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
45	chr19:20982800-20991200	ZNF genes & repeats	Duodenum Mucosa	Duodenum
46	chr19:20983000-20984400	Weak transcription	Esophagus	oesophagus
47	chr19:20983000-20984400	Weak transcription	Gastric	stomach
48	chr19:20983000-20985000	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr19:20983000-20987600	Weak transcription	Brain Anterior Caudate	brain
50	chr19:20983200-20984400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood

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