Variant report

Variant rs34550632
Chromosome Location chr5:79549036-79549037
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79542400-79550400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr5:79543600-79549200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:79543600-79549200 Weak transcription Ovary ovary
4 chr5:79543600-79550600 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr5:79543800-79549200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr5:79543800-79549400 Weak transcription Spleen Spleen
7 chr5:79543800-79549800 Weak transcription Stomach Smooth Muscle stomach
8 chr5:79544200-79549200 Weak transcription Placenta Amnion Placenta Amnion
9 chr5:79544200-79549400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr5:79544200-79550200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr5:79544200-79550400 Weak transcription HSMM muscle
12 chr5:79544200-79550600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr5:79544400-79550000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr5:79544400-79550600 Weak transcription Hela-S3 cervix
15 chr5:79544600-79549200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr5:79544600-79549800 Weak transcription Primary B cells from cord blood blood
17 chr5:79544600-79549800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr5:79544600-79550400 Weak transcription HSMMtube muscle
19 chr5:79544800-79549400 Weak transcription K562 blood
20 chr5:79544800-79550400 Weak transcription Muscle Satellite Cultured Cells --
21 chr5:79544800-79550400 Weak transcription GM12878-XiMat blood
22 chr5:79546000-79550400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr5:79546400-79549800 Enhancers Sigmoid Colon Sigmoid Colon
24 chr5:79546600-79549800 Weak transcription Fetal Muscle Trunk muscle
25 chr5:79546800-79549800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr5:79547000-79549200 Enhancers NHEK skin
27 chr5:79547000-79549800 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr5:79547400-79550000 Enhancers Adipose Nuclei Adipose
29 chr5:79547600-79549200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr5:79547600-79549400 Enhancers Osteobl bone
31 chr5:79547600-79549600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr5:79547600-79549800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
33 chr5:79547600-79550000 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr5:79547600-79550400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr5:79547600-79550400 Enhancers Pancreas Pancrea
36 chr5:79547800-79549800 Enhancers Placenta Placenta
37 chr5:79547800-79549800 Flanking Active TSS HepG2 liver
38 chr5:79547800-79550000 Enhancers Fetal Thymus thymus
39 chr5:79547800-79551000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
40 chr5:79548000-79549200 Enhancers Lung lung
41 chr5:79548000-79549200 Weak transcription Psoas Muscle Psoas
42 chr5:79548000-79549600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
43 chr5:79548000-79549600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
44 chr5:79548000-79550000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr5:79548000-79550400 Enhancers Gastric stomach
46 chr5:79548000-79550400 Enhancers Stomach Mucosa stomach
47 chr5:79548200-79549200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr5:79548200-79549400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
49 chr5:79548200-79549800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
50 chr5:79548200-79550000 Enhancers Fetal Heart heart

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