The 2.0 version of rSNPBase

Variant report

Variant rs34572227
Chromosome Location chr17:38065024-38065025
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38049200-38075400 Weak transcription Brain Cingulate Gyrus brain
2 chr17:38052600-38074200 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr17:38055600-38077400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr17:38056200-38065400 Weak transcription Placenta Placenta
5 chr17:38056800-38074600 Weak transcription NH-A brain
6 chr17:38057000-38068800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr17:38057200-38074400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr17:38057400-38075400 Weak transcription HSMM muscle
9 chr17:38057600-38076600 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr17:38057800-38077600 Weak transcription Muscle Satellite Cultured Cells --
11 chr17:38058000-38065200 Weak transcription Placenta Amnion Placenta Amnion
12 chr17:38058000-38067600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr17:38058000-38074600 Weak transcription Left Ventricle heart
14 chr17:38058200-38076200 Weak transcription Fetal Lung lung
15 chr17:38058200-38077800 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr17:38058400-38075400 Weak transcription H9 Cell Line embryonic stem cell
17 chr17:38058600-38075400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr17:38058600-38077400 Weak transcription Colon Smooth Muscle Colon
19 chr17:38058800-38071800 Weak transcription Stomach Mucosa stomach
20 chr17:38059000-38065200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr17:38059000-38070400 Strong transcription Fetal Stomach stomach
22 chr17:38059000-38071000 Strong transcription Thymus Thymus
23 chr17:38059000-38082400 Weak transcription Psoas Muscle Psoas
24 chr17:38059200-38070600 Strong transcription Sigmoid Colon Sigmoid Colon
25 chr17:38059200-38075400 Weak transcription Brain Hippocampus Middle brain
26 chr17:38059400-38074000 Weak transcription Small Intestine intestine
27 chr17:38059600-38067800 Weak transcription Rectal Smooth Muscle rectum
28 chr17:38059800-38070800 Strong transcription Duodenum Mucosa Duodenum
29 chr17:38059800-38077200 Weak transcription Esophagus oesophagus
30 chr17:38060000-38066600 Weak transcription Brain Substantia Nigra brain
31 chr17:38060000-38077400 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr17:38060200-38065200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr17:38060200-38065800 Weak transcription Primary B cells from peripheral blood blood
34 chr17:38060200-38071400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr17:38060400-38065200 Weak transcription H1 Cell Line embryonic stem cell
36 chr17:38060400-38065400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr17:38060400-38069600 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr17:38060400-38069800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr17:38060400-38070800 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr17:38060400-38071200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
41 chr17:38060400-38081600 Weak transcription Fetal Brain Male brain
42 chr17:38060600-38065400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr17:38060600-38073000 Weak transcription Primary hematopoietic stem cells blood
44 chr17:38060800-38068000 Strong transcription Adipose Nuclei Adipose
45 chr17:38060800-38075600 Strong transcription Primary T cells from cord blood blood
46 chr17:38061000-38065800 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr17:38061000-38068200 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr17:38061000-38069800 Weak transcription Aorta Aorta
49 chr17:38061000-38072800 Weak transcription K562 blood
50 chr17:38061000-38074200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015