The 2.0 version of rSNPBase

Variant report

Variant rs34892951
Chromosome Location chr5:79098677-79098678
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79081000-79098800 Weak transcription Adipose Nuclei Adipose
2 chr5:79084800-79107400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr5:79085000-79102200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr5:79087000-79099000 Weak transcription Fetal Lung lung
5 chr5:79091000-79100400 Weak transcription Stomach Smooth Muscle stomach
6 chr5:79092000-79099000 Weak transcription Rectal Smooth Muscle rectum
7 chr5:79092000-79099000 Weak transcription Right Atrium heart
8 chr5:79092000-79101800 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr5:79092000-79102200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr5:79092000-79102600 Weak transcription Fetal Stomach stomach
11 chr5:79092000-79103200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr5:79093600-79099200 Genic enhancers Skeletal Muscle Male skeletal muscle
13 chr5:79093600-79100600 Genic enhancers Skeletal Muscle Female skeletal muscle
14 chr5:79094600-79102200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr5:79095800-79098800 Weak transcription Psoas Muscle Psoas
16 chr5:79095800-79099600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr5:79096000-79099200 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr5:79096600-79099000 Enhancers Primary T helper cells PMA-I stimulated --
19 chr5:79096600-79099200 Enhancers Primary monocytes fromperipheralblood blood
20 chr5:79096600-79099400 Genic enhancers Fetal Muscle Leg muscle
21 chr5:79096800-79098800 Enhancers Primary T helper cells fromperipheralblood blood
22 chr5:79096800-79099200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr5:79096800-79099200 Enhancers K562 blood
24 chr5:79096800-79099400 Enhancers Rectal Mucosa Donor 31 rectum
25 chr5:79097000-79099000 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr5:79097000-79099200 Enhancers Primary T cells from cord blood blood
27 chr5:79097000-79099200 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr5:79097000-79102200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr5:79097200-79099000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr5:79097200-79099200 Enhancers Dnd41 blood
31 chr5:79097200-79105200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr5:79097400-79098800 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr5:79097400-79100800 Weak transcription Placenta Placenta
34 chr5:79097600-79099000 Strong transcription Left Ventricle heart
35 chr5:79097600-79099000 Weak transcription Right Ventricle heart
36 chr5:79097600-79102200 Weak transcription Ovary ovary
37 chr5:79097800-79099200 Weak transcription Fetal Muscle Trunk muscle
38 chr5:79097800-79105600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr5:79098400-79099400 Enhancers Colon Smooth Muscle Colon
40 chr5:79098400-79102600 Weak transcription Fetal Thymus thymus
41 chr5:79098600-79099000 Strong transcription Fetal Heart heart
42 chr5:79098600-79099000 Enhancers Monocytes-CD14+_RO01746 blood
43 chr5:79098600-79099200 Enhancers Thymus Thymus
44 chr5:79098600-79099400 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr5:79098600-79102400 Weak transcription Brain Angular Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015