Variant report

Variant rs34995588
Chromosome Location chr5:124223926-124223927
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:124209600-124224800 Weak transcription Fetal Brain Male brain
2 chr5:124215800-124224800 Weak transcription Pancreas Pancrea
3 chr5:124220000-124224000 Weak transcription Fetal Stomach stomach
4 chr5:124222200-124227000 Enhancers Dnd41 blood
5 chr5:124222400-124224000 Enhancers iPS-20b Cell Line embryonic stem cell
6 chr5:124222400-124224000 Enhancers Brain Hippocampus Middle brain
7 chr5:124222400-124225400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr5:124222600-124224000 Enhancers Brain Anterior Caudate brain
9 chr5:124222600-124224000 Enhancers Brain Substantia Nigra brain
10 chr5:124222600-124225600 Enhancers Cortex derived primary cultured neurospheres brain
11 chr5:124222800-124224600 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr5:124222800-124224600 Enhancers Fetal Lung lung
13 chr5:124222800-124224800 Enhancers HUES48 Cell Line embryonic stem cell
14 chr5:124222800-124225200 Enhancers Skeletal Muscle Male skeletal muscle
15 chr5:124222800-124225800 Enhancers HUES64 Cell Line embryonic stem cell
16 chr5:124223000-124225400 Enhancers H1 Cell Line embryonic stem cell
17 chr5:124223000-124225400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:124223000-124225600 Enhancers HUES6 Cell Line embryonic stem cell
19 chr5:124223000-124225600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr5:124223000-124226200 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr5:124223200-124224000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr5:124223200-124224000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr5:124223200-124224000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr5:124223200-124224000 Weak transcription Fetal Muscle Leg muscle
25 chr5:124223200-124224400 Weak transcription H9 Cell Line embryonic stem cell
26 chr5:124223200-124224400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr5:124223200-124224600 Weak transcription Small Intestine intestine
28 chr5:124223200-124224800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr5:124223200-124225800 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr5:124223200-124242200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr5:124223400-124224000 Active TSS Liver Liver
32 chr5:124223400-124224000 Active TSS Fetal Intestine Small intestine
33 chr5:124223400-124224000 Weak transcription Fetal Thymus thymus
34 chr5:124223400-124224400 Active TSS Rectal Mucosa Donor 29 rectum
35 chr5:124223400-124224600 Enhancers Brain Inferior Temporal Lobe brain
36 chr5:124223400-124225400 Enhancers Fetal Heart heart
37 chr5:124223400-124225600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr5:124223400-124225600 Enhancers iPS-15b Cell Line embryonic stem cell
39 chr5:124223600-124224000 Active TSS Duodenum Mucosa Duodenum
40 chr5:124223600-124224000 Active TSS HepG2 liver
41 chr5:124223600-124224200 Active TSS Fetal Intestine Large intestine
42 chr5:124223600-124224200 Flanking Active TSS A549 lung
43 chr5:124223600-124224600 Active TSS Pancreatic Islets Pancreatic Islet
44 chr5:124223600-124224600 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr5:124223600-124224800 Weak transcription Adipose Nuclei Adipose
46 chr5:124223600-124225200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr5:124223800-124224000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
48 chr5:124223800-124224000 Enhancers Brain Angular Gyrus brain
49 chr5:124223800-124224000 Flanking Active TSS Brain Cingulate Gyrus brain
50 chr5:124223800-124224000 Active TSS Psoas Muscle Psoas

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