Variant report

Variant rs56079931
Chromosome Location chr5:124255027-124255028
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:124249400-124263200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:124251200-124259400 Enhancers Dnd41 blood
3 chr5:124254000-124257200 Enhancers Primary neutrophils fromperipheralblood blood
4 chr5:124254000-124259800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:124254000-124260200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr5:124254200-124255200 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr5:124254200-124256000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
8 chr5:124254200-124256200 Enhancers Brain Anterior Caudate brain
9 chr5:124254200-124257600 Enhancers Primary monocytes fromperipheralblood blood
10 chr5:124254200-124259200 Enhancers ES-I3 Cell Line embryonic stem cell
11 chr5:124254200-124259200 Enhancers iPS-20b Cell Line embryonic stem cell
12 chr5:124254200-124259400 Enhancers HUES48 Cell Line embryonic stem cell
13 chr5:124254200-124259400 Enhancers iPS-15b Cell Line embryonic stem cell
14 chr5:124254200-124259600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr5:124254200-124259600 Enhancers Brain Substantia Nigra brain
16 chr5:124254200-124259800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr5:124254200-124259800 Enhancers HUES64 Cell Line embryonic stem cell
18 chr5:124254200-124259800 Enhancers Cortex derived primary cultured neurospheres brain
19 chr5:124254200-124259800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:124254200-124259800 Enhancers Brain Hippocampus Middle brain
21 chr5:124254200-124260400 Enhancers Brain Cingulate Gyrus brain
22 chr5:124254400-124255200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr5:124254400-124255200 Enhancers Brain Angular Gyrus brain
24 chr5:124254400-124255200 Enhancers GM12878-XiMat blood
25 chr5:124254400-124255400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr5:124254400-124255400 Weak transcription Fetal Lung lung
27 chr5:124254400-124256600 Enhancers Brain Germinal Matrix brain
28 chr5:124254400-124256600 Enhancers Brain Inferior Temporal Lobe brain
29 chr5:124254400-124256800 Enhancers Primary B cells from cord blood blood
30 chr5:124254400-124259400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr5:124254400-124259600 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr5:124254600-124260200 Enhancers HUES6 Cell Line embryonic stem cell
33 chr5:124254800-124255200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
34 chr5:124254800-124256200 Enhancers H1 Cell Line embryonic stem cell
35 chr5:124255000-124255800 Weak transcription Primary B cells from peripheral blood blood

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