Variant report

Variant	rs6863204
Chromosome Location	chr5:124247941-124247942
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs34995588	1.00[AMR][1000 genomes]
rs56079931	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57462652	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57604228	1.00[AMR][1000 genomes]
rs57638155	1.00[AMR][1000 genomes]
rs58364499	1.00[AMR][1000 genomes]
rs6883637	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73782506	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73782507	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73782514	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73782524	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73782525	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73784349	1.00[AMR][1000 genomes]
rs7732057	1.00[AMR][1000 genomes]
rs7734503	1.00[AMR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124242600-124248000	Weak transcription	Primary B cells from peripheral blood	blood
2	chr5:124242800-124248600	Enhancers	Brain Substantia Nigra	brain
3	chr5:124243000-124248600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr5:124243000-124248600	Weak transcription	Primary B cells from cord blood	blood
5	chr5:124244800-124248800	Weak transcription	Left Ventricle	heart
6	chr5:124245400-124249000	Enhancers	GM12878-XiMat	blood
7	chr5:124245800-124248400	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr5:124245800-124248400	Weak transcription	Dnd41	blood
9	chr5:124245800-124248600	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr5:124246000-124254200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr5:124246600-124248800	Weak transcription	Ovary	ovary
12	chr5:124246800-124248200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr5:124246800-124248200	Weak transcription	Psoas Muscle	Psoas
14	chr5:124247000-124249600	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr5:124247200-124249400	Enhancers	Primary monocytes fromperipheralblood	blood
16	chr5:124247400-124248000	Enhancers	Monocytes-CD14+_RO01746	blood
17	chr5:124247400-124248600	Weak transcription	Brain Hippocampus Middle	brain
18	chr5:124247600-124248400	Weak transcription	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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