Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10008068	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10010853	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13112641	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13122707	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13140818	0.83[ASN][1000 genomes]
rs16884201	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28489161	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28752062	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34059778	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34170853	0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs34384535	0.82[AMR][1000 genomes]
rs34547954	0.86[ASN][1000 genomes]
rs34625421	1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs34905305	0.91[AMR][1000 genomes]
rs35117412	0.82[AMR][1000 genomes]
rs35235147	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35554621	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61794533	1.00[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs61794534	1.00[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs61795875	0.95[AMR][1000 genomes]
rs71598132	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs71598134	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878810	chr4:30823157-30987395	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv998450	chr4:30823631-31628179	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30906000-30909000	Weak transcription	Hela-S3	cervix
2	chr4:30907000-30913800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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