Variant report

Variant	rs35380447
Chromosome Location	chr2:76303314-76303315
allele	-/A/AT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10195421	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11895605	0.86[EUR][1000 genomes]
rs13391277	0.93[EUR][1000 genomes]
rs13413589	0.95[EUR][1000 genomes]
rs1524210	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1608591	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1916871	0.87[EUR][1000 genomes]
rs2901741	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6709581	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6756217	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7595802	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834265	chr2:76275611-76450728	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76302600-76307400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links