Variant report

Variant	rs7595802
Chromosome Location	chr2:76311972-76311973
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:76307944..76309997-chr2:76310898..76313545,3	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10195421	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.88[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11895605	0.86[EUR][1000 genomes]
rs12612816	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12615814	0.82[ASN][1000 genomes]
rs13391277	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13413589	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1524210	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1524215	0.89[CHB][hapmap];0.88[JPT][hapmap]
rs1608591	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1916871	0.86[EUR][1000 genomes]
rs2901741	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs317234	0.81[ASN][1000 genomes]
rs35380447	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs371016	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs375530	0.84[ASN][1000 genomes]
rs379749	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs380810	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs381100	0.81[ASN][1000 genomes]
rs384304	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs389616	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs390189	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs390652	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs390687	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs394278	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs397424	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs403631	0.84[ASN][1000 genomes]
rs410367	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs410954	0.84[ASN][1000 genomes]
rs416093	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs416264	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs421884	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs422600	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs432117	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs454793	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6709581	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6756217	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834265	chr2:76275611-76450728	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76311600-76312000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr2:76311800-76312600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links